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MS014401 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014401
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold19:765166..765300
RNA-Seq ExpressionMS014401
SyntenyMS014401
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN63137.1 hypothetical protein VITISV_034570 [Vitis vinifera]8.3e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        + LQ R P   LNP+IC+LC + GES DH+ +HC  T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
RVW46830.1 putative ribonuclease H protein [Vitis vinifera]8.3e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        +KLQ R P   L P +C+LC   GES+DH+ +HCP T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
RVW53835.1 hypothetical protein CK203_088568 [Vitis vinifera]1.1e-0450Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        +KLQ R P   L+P  C+LC   GES+DH+ +HCP T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
RVW55720.1 hypothetical protein CK203_085247 [Vitis vinifera]6.4e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        +KLQ R P  +L+P  C+LC   GES+DH+ +HCP T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
RVX21954.1 hypothetical protein CK203_001531 [Vitis vinifera]6.4e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        +KLQ R P  +L+P  C+LC   GES+DH+ +HCP T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
TrEMBL top hitse value%identityAlignment
A0A438EGK2 Putative ribonuclease H protein4.0e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        +KLQ R P   L P +C+LC   GES+DH+ +HCP T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
A0A438F1J0 zf-RVT domain-containing protein5.3e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        +KLQ R P   L+P  C+LC   GES+DH+ +HCP T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
A0A438F6T1 zf-RVT domain-containing protein3.1e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        +KLQ R P  +L+P  C+LC   GES+DH+ +HCP T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
A0A438KL67 zf-RVT domain-containing protein3.1e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        +KLQ R P  +L+P  C+LC   GES+DH+ +HCP T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
A5B4I7 zf-RVT domain-containing protein4.0e-0550Show/hide
Query:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
        + LQ R P   LNP+IC+LC + GES DH+ +HC  T  +W RL
Subjt:  EKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGAAAAGTTGCAATCTAGGCTCCCAAACCATCTTCTGAATCCTAGTATTTGCCTTCTCTGTCACCAATTTGGAGAATCTTTGGACCACATCATGGTCCATTGTCCATA
CACCACATCTATTTGGGACCGTCTG
mRNA sequenceShow/hide mRNA sequence
GTTGAAAAGTTGCAATCTAGGCTCCCAAACCATCTTCTGAATCCTAGTATTTGCCTTCTCTGTCACCAATTTGGAGAATCTTTGGACCACATCATGGTCCATTGTCCATA
CACCACATCTATTTGGGACCGTCTG
Protein sequenceShow/hide protein sequence
VEKLQSRLPNHLLNPSICLLCHQFGESLDHIMVHCPYTTSIWDRL