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MS014459 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014459
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLate embryogenesis abundant protein (LEA) family protein
Genome locationscaffold553:19538..21903
RNA-Seq ExpressionMS014459
SyntenyMS014459
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598970.1 hypothetical protein SDJN03_08748, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3564.67Show/hide
Query:  MASFTLLKTLPKFCHLGA-AIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E
        M S+TL K+LPKF H GA AIARRS  SN  LL  SNPK +H N    G+ EAKDAINP ANE M PGE MM + AYSTA+HV EK  DM GM+ +   E
Subjt:  MASFTLLKTLPKFCHLGA-AIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E

Query:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
        +S KAK+ MEAA DSA RAKDTVVE TK+SK+FVKANA++V+K MNTKNR
Subjt:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR

XP_022144549.1 uncharacterized protein At4g13230-like [Momordica charantia]1.4e-6695.3Show/hide
Query:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHV----NAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMSEI
        MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMH     +AINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMV SEI
Subjt:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHV----NAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMSEI

Query:  SEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
        SEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
Subjt:  SEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR

XP_022933143.1 uncharacterized protein At4g13230 [Cucurbita moschata]5.9e-3665.33Show/hide
Query:  MASFTLLKTLPKFCHLGA-AIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E
        M S TL K+LPKF H GA AIARRS  SN  LL  SNPKF+H N    G+ EAKDAINP ANE M PGE MM + AYSTA+HV EK  DM GM+ +   E
Subjt:  MASFTLLKTLPKFCHLGA-AIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E

Query:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
        +S KAK+ MEAA DSA RAKDTVVE TK+SK+FVKANA++V+K MNTKNR
Subjt:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR

XP_023546410.1 uncharacterized protein At4g13230 [Cucurbita pepo subsp. pepo]4.2e-3464Show/hide
Query:  MASFTLLKTLPKFCHLGA-AIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E
        M S TL K+LPKF H GA AIARRS  SN  LL  SNPK +H N    G  EAKDAI P ANE M PGE MM + AYSTA+HV EK  DM GM+ +   E
Subjt:  MASFTLLKTLPKFCHLGA-AIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E

Query:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
        +S KAK+ MEAA DSA RAKDTVVE TK+SK+FVKANA++V+K MNTKNR
Subjt:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR

XP_038889268.1 uncharacterized protein At4g13230-like [Benincasa hispida]3.3e-3965.79Show/hide
Query:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMSE---I
        MAS TL K LPKF H GAAI RRST SN  L+L SNPKF+H N    G+ EAKDAINPGANE MMPGE+MM + AYSTA+HV EK  DM GMV ++   +
Subjt:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMSE---I

Query:  SEKAKQTMEAAWDS----AQRAKDTVVEATKESKEFVKANAESVKKSMNTKN
        S KAKQ MEAAWDS    AQRAKDT+V+   +SK+FVKAN +SV+KSMNTKN
Subjt:  SEKAKQTMEAAWDS----AQRAKDTVVEATKESKEFVKANAESVKKSMNTKN

TrEMBL top hitse value%identityAlignment
A0A2N9J2L7 Uncharacterized protein2.3e-2549.01Show/hide
Query:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMS---EIS
        MAS +L+  LPKF H GAAIARR+T  NP L + SNP+ +  ++    +  A DA+  GAN+A   G+++  +A+STA+HV +K  DM GM+ +   +++
Subjt:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMS---EIS

Query:  EKAKQTMEAAW----DSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKN
        EKAKQT + AW    D+AQ+AKDTV+   +ESKE +K NAE+VK+SMNTKN
Subjt:  EKAKQTMEAAW----DSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKN

A0A6J1CSM2 uncharacterized protein At4g13230-like7.0e-6795.3Show/hide
Query:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHV----NAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMSEI
        MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMH     +AINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMV SEI
Subjt:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHV----NAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMSEI

Query:  SEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
        SEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
Subjt:  SEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR

A0A6J1F3W7 uncharacterized protein At4g132302.9e-3665.33Show/hide
Query:  MASFTLLKTLPKFCHLGA-AIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E
        M S TL K+LPKF H GA AIARRS  SN  LL  SNPKF+H N    G+ EAKDAINP ANE M PGE MM + AYSTA+HV EK  DM GM+ +   E
Subjt:  MASFTLLKTLPKFCHLGA-AIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E

Query:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
        +S KAK+ MEAA DSA RAKDTVVE TK+SK+FVKANA++V+K MNTKNR
Subjt:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR

A0A6J1ICL4 uncharacterized protein At4g132301.0e-3363.33Show/hide
Query:  MASFTLLKTLPKFCHLGAA-IARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E
        M S TL K+LPKF H GAA IA RS  SN  L   SNPKF+H N    G+ EAKDAINP ANE M  GE MM + AYSTA+HV EK  DM GM+ +   E
Subjt:  MASFTLLKTLPKFCHLGAA-IARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTE-AYSTAQHVREKASDMGGMVMS---E

Query:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR
        +S KAKQ MEAA DSA RAKD+VVE TK+SK+FVKANA++V+K MNTKNR
Subjt:  ISEKAKQTMEAAWDSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR

A0A7N2KQQ7 Uncharacterized protein2.6e-2146.36Show/hide
Query:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMS---EIS
        MAS TL+ +LPKF H G+AI RRST  NP L     P+ +  ++    +  A DA+  GANEA   GE++  +A STA+HV +   DM G + +   +++
Subjt:  MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMS---EIS

Query:  EKAKQTMEAAW----DSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKN
        EK KQT + AW    D+AQ+AKD V+  T+ESKE +K +AE+VK SMNTKN
Subjt:  EKAKQTMEAAW----DSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKN

SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132301.9e-0541.18Show/hide
Query:  ESMMTEAYSTAQHVREKASDMGGMVMSE----ISEKAKQTMEAAW----DSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKN
        +S+  +A    Q V +KA D G   +S+    + +KAK T E AW    D+ ++ KDTV   T+E+KE +KA A++V++SMNTKN
Subjt:  ESMMTEAYSTAQHVREKASDMGGMVMSE----ISEKAKQTMEAAW----DSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKN

Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein1.4e-0641.18Show/hide
Query:  ESMMTEAYSTAQHVREKASDMGGMVMSE----ISEKAKQTMEAAW----DSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKN
        +S+  +A    Q V +KA D G   +S+    + +KAK T E AW    D+ ++ KDTV   T+E+KE +KA A++V++SMNTKN
Subjt:  ESMMTEAYSTAQHVREKASDMGGMVMSE----ISEKAKQTMEAAW----DSAQRAKDTVVEATKESKEFVKANAESVKKSMNTKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCTTTACTCTCCTCAAAACCCTTCCAAAGTTTTGTCATCTTGGTGCTGCAATTGCAAGGAGATCTACTGCCTCCAACCCTATCCTCCTTTTGCCTTCTAACCC
TAAATTTATGCATGTAAATGCCATCAACCCAGGAGCCCCAGAAGCCAAAGATGCCATAAACCCAGGAGCTAATGAAGCAATGATGCCTGGTGAAAGTATGATGACAGAGG
CTTACTCTACTGCACAACATGTGAGGGAAAAGGCAAGCGATATGGGAGGCATGGTGATGAGTGAGATTTCAGAGAAGGCGAAGCAGACGATGGAAGCGGCGTGGGACTCC
GCCCAGAGGGCAAAAGACACAGTGGTGGAGGCTACCAAAGAATCTAAGGAATTTGTCAAAGCAAACGCAGAATCTGTCAAGAAGAGCATGAACACCAAGAATCGT
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCTTTACTCTCCTCAAAACCCTTCCAAAGTTTTGTCATCTTGGTGCTGCAATTGCAAGGAGATCTACTGCCTCCAACCCTATCCTCCTTTTGCCTTCTAACCC
TAAATTTATGCATGTAAATGCCATCAACCCAGGAGCCCCAGAAGCCAAAGATGCCATAAACCCAGGAGCTAATGAAGCAATGATGCCTGGTGAAAGTATGATGACAGAGG
CTTACTCTACTGCACAACATGTGAGGGAAAAGGCAAGCGATATGGGAGGCATGGTGATGAGTGAGATTTCAGAGAAGGCGAAGCAGACGATGGAAGCGGCGTGGGACTCC
GCCCAGAGGGCAAAAGACACAGTGGTGGAGGCTACCAAAGAATCTAAGGAATTTGTCAAAGCAAACGCAGAATCTGTCAAGAAGAGCATGAACACCAAGAATCGT
Protein sequenceShow/hide protein sequence
MASFTLLKTLPKFCHLGAAIARRSTASNPILLLPSNPKFMHVNAINPGAPEAKDAINPGANEAMMPGESMMTEAYSTAQHVREKASDMGGMVMSEISEKAKQTMEAAWDS
AQRAKDTVVEATKESKEFVKANAESVKKSMNTKNR