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MS014465 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014465
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold553:106132..106403
RNA-Seq ExpressionMS014465
SyntenyMS014465
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016641 - oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN73539.1 hypothetical protein VITISV_037097 [Vitis vinifera]1.5e-0545.45Show/hide
Query:  IMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        + +SK+P KVKA +WI A  K      LQ +RPY ++  Q CILCK   E  DHLF  CP     W
Subjt:  IMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

ONI36148.1 hypothetical protein PRUPE_1G572100 [Prunus persica]1.9e-0848.53Show/hide
Query:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        +L+  +K P KVK F+W+ AL K      +QRKRP+M +S Q C+LCK  EE  DHLF  CPF    W
Subjt:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

RVW53835.1 hypothetical protein CK203_088568 [Vitis vinifera]5.1e-0638.2Show/hide
Query:  FFECSQLSVIQEGEALDSSFVNLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        F E   L +++  ++ +     + M  K+P KVKA  W+ A  K      LQ +RPY A+S Q CILCK   E  DHLF  CP     W
Subjt:  FFECSQLSVIQEGEALDSSFVNLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

RVX19652.1 hypothetical protein CK203_005129 [Vitis vinifera]5.1e-0646.97Show/hide
Query:  IMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        + +SK+P KVKA  W+ A  K      LQ +RPY A+S Q CILCK   E  DHLF  CP     W
Subjt:  IMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

VVA21329.1 Hypothetical predicted protein [Prunus dulcis]1.9e-0848.53Show/hide
Query:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        +L+  +K P KVK F+W+ AL K      +QRKRP+M +S Q C+LCK  EE  DHLF  CPF    W
Subjt:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

TrEMBL top hitse value%identityAlignment
A0A251RJG1 zf-RVT domain-containing protein9.1e-0948.53Show/hide
Query:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        +L+  +K P KVK F+W+ AL K      +QRKRP+M +S Q C+LCK  EE  DHLF  CPF    W
Subjt:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

A0A438F1J0 zf-RVT domain-containing protein2.5e-0638.2Show/hide
Query:  FFECSQLSVIQEGEALDSSFVNLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        F E   L +++  ++ +     + M  K+P KVKA  W+ A  K      LQ +RPY A+S Q CILCK   E  DHLF  CP     W
Subjt:  FFECSQLSVIQEGEALDSSFVNLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

A0A5E4F2L4 zf-RVT domain-containing protein9.1e-0948.53Show/hide
Query:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        +L+  +K P KVK F+W+ AL K      +QRKRP+M +S Q C+LCK  EE  DHLF  CPF    W
Subjt:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

M5WEY8 zf-RVT domain-containing protein (Fragment)1.7e-0739.53Show/hide
Query:  FFECS--QLSVIQEGEALDSSFVNLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPF
        +F C   Q  +  +G  +     +L+  +K P +VK F+W+ AL K      +QRKRP+M +S   C+LCK+ EE  DHLF  CPF
Subjt:  FFECS--QLSVIQEGEALDSSFVNLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPF

M5XJT6 zf-RVT domain-containing protein (Fragment)9.1e-0948.53Show/hide
Query:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW
        +L+  +K P KVK F+W+ AL K      +QRKRP+M +S Q C+LCK  EE  DHLF  CPF    W
Subjt:  NLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQ-CILCKNGEEDQDHLFFGCPFPFLCW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTTCTTTGAATGCTCACAGTTATCAGTGATACAAGAAGGAGAAGCTCTAGACTCTTCCTTCGTGAATCTCATAATGAATTCGAAAATGCCAAAGAAGGTTAAAGCCTT
CCTCTGGATTTTTGCTCTTCAAAAGGCTGAATGCTTGCTGAATCTACAAAGGAAGAGGCCCTACATGGCTATATCAAGCCAGTGCATTCTCTGCAAAAATGGGGAAGAAG
ATCAAGACCATCTTTTCTTTGGCTGCCCTTTTCCATTCTTATGCTGG
mRNA sequenceShow/hide mRNA sequence
AACTTCTTTGAATGCTCACAGTTATCAGTGATACAAGAAGGAGAAGCTCTAGACTCTTCCTTCGTGAATCTCATAATGAATTCGAAAATGCCAAAGAAGGTTAAAGCCTT
CCTCTGGATTTTTGCTCTTCAAAAGGCTGAATGCTTGCTGAATCTACAAAGGAAGAGGCCCTACATGGCTATATCAAGCCAGTGCATTCTCTGCAAAAATGGGGAAGAAG
ATCAAGACCATCTTTTCTTTGGCTGCCCTTTTCCATTCTTATGCTGG
Protein sequenceShow/hide protein sequence
NFFECSQLSVIQEGEALDSSFVNLIMNSKMPKKVKAFLWIFALQKAECLLNLQRKRPYMAISSQCILCKNGEEDQDHLFFGCPFPFLCW