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MS014507 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014507
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionClp R domain-containing protein
Genome locationscaffold553:480442..481765
RNA-Seq ExpressionMS014507
SyntenyMS014507
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018156.1 hypothetical protein SDJN02_20024 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-6690.51Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVERRGHDAARFHSI HAHGWEEDVV +V+KKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKN + ISFECQTLKSEQAAE+HIRQFIPKL GQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
XP_022144426.1 uncharacterized protein LOC111014113 isoform X1 [Momordica charantia]2.2e-72100Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
XP_022144427.1 uncharacterized protein LOC111014113 isoform X2 [Momordica charantia]2.2e-72100Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
XP_022930568.1 uncharacterized protein LOC111436977 isoform X1 [Cucurbita moschata]1.2e-6589.78Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVERRGHDAARF SI HAHGWEEDVV +V+KKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKN + ISFECQTLKSEQAAE+HIRQFIPKL GQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
XP_023515562.1 uncharacterized protein LOC111779684 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-6589.78Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVERRGHDAARF SI HAHGWEEDVV +V+KKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKN + ISFECQTLKSEQAAE+HIRQFIPKL GQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
TrEMBL top hitse value%identityAlignment
A0A0A0LAZ2 Uncharacterized protein7.3e-6689.05Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVE RGHDAARFHSI HAHGWEEDVVS+V+KKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKN++ +SFECQ LKSE+AAE+HIRQF+PKL GQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
A0A6J1CTD5 uncharacterized protein LOC111014113 isoform X11.1e-72100Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
A0A6J1CTN4 uncharacterized protein LOC111014113 isoform X21.1e-72100Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
A0A6J1ERU0 uncharacterized protein LOC111436977 isoform X25.6e-6689.78Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVERRGHDAARF SI HAHGWEEDVV +V+KKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKN + ISFECQTLKSEQAAE+HIRQFIPKL GQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
A0A6J1EVL3 uncharacterized protein LOC111436977 isoform X15.6e-6689.78Show/hide
Query:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH
        MAMEGVASIALLPCGSVSGHFIQLPH +CYGLHGTELECERECSRGEDYRLIKLTITNYNNK+E+TVVVERRGHDAARF SI HAHGWEEDVV +V+KKH
Subjt:  MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKH

Query:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        GKN + ISFECQTLKSEQAAE+HIRQFIPKL GQDAV
Subjt:  GKNQVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29280.1 unknown protein2.0e-6077.61Show/hide
Query:  EGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKHGKN
        EGVASIALLPCG++SGHFIQ+P SICYGLHGTEL CE ECSRGEDYRLIKLTI +YN KKEQTVVVE +GHDAAR + +EHAHGWEEDV+ LV++KHGK 
Subjt:  EGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKHGKN

Query:  QVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV
        +V++SFEC+TLK+++AAE+HIRQF+PKLAG DAV
Subjt:  QVAISFECQTLKSEQAAEEHIRQFIPKLAGQDAV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGAAGGAGTAGCTTCAATCGCACTTCTGCCGTGCGGCTCAGTCTCCGGCCACTTCATTCAACTTCCTCACTCAATCTGCTACGGCCTCCATGGCACTGAATT
GGAATGTGAAAGAGAATGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTCACTATTACAAACTACAATAATAAGAAAGAACAAACAGTCGTTGTTGAACGTAGAGGCC
ATGACGCTGCACGGTTTCACAGCATTGAGCACGCTCATGGTTGGGAAGAGGATGTAGTAAGCCTGGTTAAAAAGAAGCATGGAAAGAACCAGGTTGCGATATCGTTCGAG
TGTCAAACATTGAAGTCGGAGCAAGCAGCCGAAGAACATATCAGACAGTTTATTCCCAAATTAGCTGGCCAGGATGCTGTG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGGAAGGAGTAGCTTCAATCGCACTTCTGCCGTGCGGCTCAGTCTCCGGCCACTTCATTCAACTTCCTCACTCAATCTGCTACGGCCTCCATGGCACTGAATT
GGAATGTGAAAGAGAATGCAGCAGGGGTGAGGATTACCGCTTGATCAAGCTCACTATTACAAACTACAATAATAAGAAAGAACAAACAGTCGTTGTTGAACGTAGAGGCC
ATGACGCTGCACGGTTTCACAGCATTGAGCACGCTCATGGTTGGGAAGAGGATGTAGTAAGCCTGGTTAAAAAGAAGCATGGAAAGAACCAGGTTGCGATATCGTTCGAG
TGTCAAACATTGAAGTCGGAGCAAGCAGCCGAAGAACATATCAGACAGTTTATTCCCAAATTAGCTGGCCAGGATGCTGTG
Protein sequenceShow/hide protein sequence
MAMEGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKKEQTVVVERRGHDAARFHSIEHAHGWEEDVVSLVKKKHGKNQVAISFE
CQTLKSEQAAEEHIRQFIPKLAGQDAV