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MS014522 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014522
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytokinin dehydrogenase
Genome locationscaffold553:585079..585260
RNA-Seq ExpressionMS014522
SyntenyMS014522
Gene Ontology termsGO:0009690 - cytokinin metabolic process (biological process)
GO:0019139 - cytokinin dehydrogenase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR015345 - Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
IPR016164 - FAD-linked oxidase-like, C-terminal
IPR016170 - Cytokinin dehydrogenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065202.1 cytokinin dehydrogenase 5 [Cucumis melo var. makuwa]3.4e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP+S+FTTDLGYVDFLDRVHK E               LNLF    RI +FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
XP_008444755.1 PREDICTED: cytokinin dehydrogenase 5 [Cucumis melo]3.4e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP+S+FTTDLGYVDFLDRVHK E               LNLF    RI +FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
XP_011649640.1 cytokinin dehydrogenase 5 [Cucumis sativus]3.4e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP+S+FTTDLGYVDFLDRVHK E               LNLF    RI +FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
XP_022144150.1 cytokinin dehydrogenase 5-like, partial [Momordica charantia]5.9e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        +YIP S+FTTDLGYVDFLDRVHK E               LNLF    RIG+FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
XP_038886192.1 LOW QUALITY PROTEIN: cytokinin dehydrogenase 5-like [Benincasa hispida]3.4e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP+S+FTTDLGYVDFLDRVHK E               LNLF    RI +FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
TrEMBL top hitse value%identityAlignment
A0A0A0LPC8 Cytokinin dehydrogenase1.7e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP+S+FTTDLGYVDFLDRVHK E               LNLF    RI +FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
A0A1S3BBY3 Cytokinin dehydrogenase1.7e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP+S+FTTDLGYVDFLDRVHK E               LNLF    RI +FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
A0A5A7VA54 Cytokinin dehydrogenase1.7e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP+S+FTTDLGYVDFLDRVHK E               LNLF    RI +FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
A0A6J1CQU7 cytokinin dehydrogenase 5-like2.8e-1459.74Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        +YIP S+FTTDLGYVDFLDRVHK E               LNLF    RIG+FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
A0A6J1KNJ0 Cytokinin dehydrogenase3.1e-1357.14Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        +YIP+S+FTTDLGYVDFLDRVH  E               LNLF    RI +FD+GVFKGILGNNTSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
SwissProt top hitse value%identityAlignment
O22213 Cytokinin dehydrogenase 12.0e-0435.06Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP ++F++++ Y++FLDRVH  E               LNL      I  F   VF  IL +N +G IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
Q5ZAY9 Cytokinin dehydrogenase 55.7e-1250Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGS-ILTTPLTR
        N+IP ++FTTDL YVDFLDRVHK E               LNLF    RI +FD+GVF+G+LG+ T+G  IL  P+ R
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGS-ILTTPLTR
Q67YU0 Cytokinin dehydrogenase 59.4e-1555.84Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        N+IP S+FTTDL YVDFLDRVHK E               LNLF    RI +FD+GVFKGILGN TSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
Q9LTS3 Cytokinin dehydrogenase 31.0e-0536.71Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGELNLFPE-----------------RIGNFDQGVFKGIL--GNNTSGSILTTPLTR
        N++   ++  D+ Y+DFL+RV  GELNL  +                 +I  FD GVFKGI+   N TSG +L  P+ R
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGELNLFPE-----------------RIGNFDQGVFKGIL--GNNTSGSILTTPLTR
Q9T0N8 Cytokinin dehydrogenase 11.5e-0437.18Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGIL-GNNTSGSILTTPLTR
        +Y+    F  D+ Y  FLDRVH  E               LN+F    RI +FD+GVFKGIL G +  G ++  PL +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGIL-GNNTSGSILTTPLTR
Arabidopsis top hitse value%identityAlignment
AT1G75450.1 cytokinin oxidase 56.7e-1655.84Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        N+IP S+FTTDL YVDFLDRVHK E               LNLF    RI +FD+GVFKGILGN TSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
AT1G75450.2 cytokinin oxidase 56.7e-1655.84Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        N+IP S+FTTDL YVDFLDRVHK E               LNLF    RI +FD+GVFKGILGN TSG IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
AT2G41510.1 cytokinin oxidase/dehydrogenase 11.4e-0535.06Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
        NYIP ++F++++ Y++FLDRVH  E               LNL      I  F   VF  IL +N +G IL  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLF--PERIGNFDQGVFKGILGNNTSGSILTTPLTR
AT3G63440.1 cytokinin oxidase/dehydrogenase 63.1e-0532.47Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLFPER--IGNFDQGVFKGILGNNTSGSILTTPLTR
        +Y+  ++FTT++ Y  FLDRVH  E               LNL   R  I  F +GVF  IL + ++G ++  P+ +
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGE---------------LNLFPER--IGNFDQGVFKGILGNNTSGSILTTPLTR
AT5G56970.1 cytokinin oxidase 37.4e-0736.71Show/hide
Query:  NYIPKSIFTTDLGYVDFLDRVHKGELNLFPE-----------------RIGNFDQGVFKGIL--GNNTSGSILTTPLTR
        N++   ++  D+ Y+DFL+RV  GELNL  +                 +I  FD GVFKGI+   N TSG +L  P+ R
Subjt:  NYIPKSIFTTDLGYVDFLDRVHKGELNLFPE-----------------RIGNFDQGVFKGIL--GNNTSGSILTTPLTR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATTACATTCCCAAGTCAATTTTCACAACGGACCTGGGGTACGTTGACTTCCTAGACCGGGTTCACAAGGGCGAGCTGAATCTCTTCCCTGAAAGGATCGGCAACTTTGA
CCAAGGAGTCTTCAAGGGCATTTTGGGAAACAACACCAGTGGGTCCATCCTCACTACCCCATTAACAAGG
mRNA sequenceShow/hide mRNA sequence
AATTACATTCCCAAGTCAATTTTCACAACGGACCTGGGGTACGTTGACTTCCTAGACCGGGTTCACAAGGGCGAGCTGAATCTCTTCCCTGAAAGGATCGGCAACTTTGA
CCAAGGAGTCTTCAAGGGCATTTTGGGAAACAACACCAGTGGGTCCATCCTCACTACCCCATTAACAAGG
Protein sequenceShow/hide protein sequence
NYIPKSIFTTDLGYVDFLDRVHKGELNLFPERIGNFDQGVFKGILGNNTSGSILTTPLTR