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MS014525 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014525
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription factor UPBEAT1-like
Genome locationscaffold553:603231..603560
RNA-Seq ExpressionMS014525
SyntenyMS014525
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056655.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]6.5e-2768.18Show/hide
Query:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYG
        MS + KKHRI WKQS TRR    SR V    R  R H+NGG AC+SD+SAKLE+L+SLIPSR+D+ G R+AE+LF++TADYIVLLK+QVFVLQRLIEFYG
Subjt:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SGTERENAVS
        S  +RENAVS
Subjt:  SGTERENAVS

KAG6607102.1 hypothetical protein SDJN03_00444, partial [Cucurbita argyrosperma subsp. sororia]6.1e-3382.35Show/hide
Query:  ISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRND-DGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTERENA
        +SWKQS TRRA  RSRY SRILRARRIHKNGGKACSSDVSA+LEAL+SLIP++N+ +G +R++EELFQETADYIVLLKNQVFVLQRLIEFYGS  ERENA
Subjt:  ISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRND-DGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTERENA

Query:  VS
        VS
Subjt:  VS

KAG7036793.1 hypothetical protein SDJN02_00413, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2776.47Show/hide
Query:  ISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRND-DGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTERENA
        +SWKQS TRRA  RSRY SRILRARRIHKNGGKACSSDVSA+LEAL+SLIP++N+ +G +R++EELFQETADYI      VFVLQRLIEFYGS  ERENA
Subjt:  ISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRND-DGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTERENA

Query:  VS
        VS
Subjt:  VS

KDP27231.1 hypothetical protein JCGZ_19930 [Jatropha curcas]7.9e-1754.46Show/hide
Query:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKAC--SSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEF
        MSSV K  +IS  ++  RR  S  +   R  +A+R   NGG+ C   S VS KLEAL++LIP+ N  G   KAE+LFQETADYIVLL+ QVFVLQRLIEF
Subjt:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKAC--SSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEF

Query:  YGSGTERENAVS
        YGS T+ +N ++
Subjt:  YGSGTERENAVS

TYK04615.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]1.7e-2769.09Show/hide
Query:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYG
        MSS+ KKHRI WKQS TRR    SR V    R  R H+NGG AC+SD+SAKLE+L+SLIPSR+D+ G R+AE+LF++TADYIVLLK+QVFVLQRLIEFYG
Subjt:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SGTERENAVS
        S  +RENAVS
Subjt:  SGTERENAVS

TrEMBL top hitse value%identityAlignment
A0A067JTG6 Uncharacterized protein3.8e-1754.46Show/hide
Query:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKAC--SSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEF
        MSSV K  +IS  ++  RR  S  +   R  +A+R   NGG+ C   S VS KLEAL++LIP+ N  G   KAE+LFQETADYIVLL+ QVFVLQRLIEF
Subjt:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKAC--SSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEF

Query:  YGSGTERENAVS
        YGS T+ +N ++
Subjt:  YGSGTERENAVS

A0A5A7UT08 Transcription factor UPBEAT1-like3.1e-2768.18Show/hide
Query:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYG
        MS + KKHRI WKQS TRR    SR V    R  R H+NGG AC+SD+SAKLE+L+SLIPSR+D+ G R+AE+LF++TADYIVLLK+QVFVLQRLIEFYG
Subjt:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SGTERENAVS
        S  +RENAVS
Subjt:  SGTERENAVS

A0A5D3BZU8 Transcription factor UPBEAT1-like8.3e-2869.09Show/hide
Query:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYG
        MSS+ KKHRI WKQS TRR    SR V    R  R H+NGG AC+SD+SAKLE+L+SLIPSR+D+ G R+AE+LF++TADYIVLLK+QVFVLQRLIEFYG
Subjt:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYG

Query:  SGTERENAVS
        S  +RENAVS
Subjt:  SGTERENAVS

A0A5N6QW57 Uncharacterized protein5.2e-1450Show/hide
Query:  MSSVVKKHRI---SWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIE
        MSS  +K +      ++  TRR  +R R  +R  RARR   NGG+ C+  VS KLEAL++LIP+ N  G   K ++LF+ETA+YIVLL+ QV +LQRL+E
Subjt:  MSSVVKKHRI---SWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIE

Query:  FYGS
        FYGS
Subjt:  FYGS

B9SJE1 Uncharacterized protein4.0e-1449.59Show/hide
Query:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIH---------KNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFV
        MSSV K  +IS KQ   ++ P +   +    R R IH         +      SS VS KLEAL++LIP+ N  G   KA++LFQETADYIVLL+ QVFV
Subjt:  MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIH---------KNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFV

Query:  LQRLIEFYGSGT---ERENAV
        LQRLI+FYGS T   + ENAV
Subjt:  LQRLIEFYGSGT---ERENAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29370.1 unknown protein6.5e-0939.58Show/hide
Query:  QSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTERENAV
        ++ T R   R+   SR         NG       V  KL AL+SL+P   + GG  + EELFQETA+YIV L+ QV VL++LIE Y + ++++  V
Subjt:  QSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTERENAV

AT5G39240.1 unknown protein7.7e-1045.56Show/hide
Query:  RRIHKNGGKACSS---DVSAKLEALESLIP--------SRND-----DGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTEREN
        RR  K  G   +S     S KL+AL+SL+P        SR D     D    + E+LFQETADYIV L+ QV VLQ+LIE YGS  ++E+
Subjt:  RRIHKNGGKACSS---DVSAKLEALESLIP--------SRND-----DGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTEREN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCGGTTGTAAAGAAACACAGGATATCTTGGAAGCAATCGGCGACGAGAAGAGCGCCGTCGCGATCGAGGTACGTTTCTCGAATTCTCAGAGCTCGAAGAATCCA
CAAAAATGGCGGAAAAGCGTGCTCCTCCGACGTATCGGCGAAGCTGGAGGCGCTCGAGAGCCTCATTCCGAGCCGGAACGACGACGGAGGAAATCGGAAAGCGGAGGAGT
TGTTTCAGGAGACGGCGGATTACATCGTTCTGTTGAAGAATCAGGTGTTCGTTTTGCAGAGGTTGATCGAGTTTTACGGATCCGGTACTGAGAGAGAAAATGCCGTATCG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCGGTTGTAAAGAAACACAGGATATCTTGGAAGCAATCGGCGACGAGAAGAGCGCCGTCGCGATCGAGGTACGTTTCTCGAATTCTCAGAGCTCGAAGAATCCA
CAAAAATGGCGGAAAAGCGTGCTCCTCCGACGTATCGGCGAAGCTGGAGGCGCTCGAGAGCCTCATTCCGAGCCGGAACGACGACGGAGGAAATCGGAAAGCGGAGGAGT
TGTTTCAGGAGACGGCGGATTACATCGTTCTGTTGAAGAATCAGGTGTTCGTTTTGCAGAGGTTGATCGAGTTTTACGGATCCGGTACTGAGAGAGAAAATGCCGTATCG
Protein sequenceShow/hide protein sequence
MSSVVKKHRISWKQSATRRAPSRSRYVSRILRARRIHKNGGKACSSDVSAKLEALESLIPSRNDDGGNRKAEELFQETADYIVLLKNQVFVLQRLIEFYGSGTERENAVS