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MS014544 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014544
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger protein CONSTANS
Genome locationscaffold553:781046..781183
RNA-Seq ExpressionMS014544
SyntenyMS014544
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR010402 - CCT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN74840.1 hypothetical protein VITISV_035527 [Vitis vinifera]1.0e-13100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

EOY03891.1 Zinc finger protein CONSTANS-LIKE 2 [Theobroma cacao]1.0e-13100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

KAA0054825.1 zinc finger protein CONSTANS-LIKE 2 [Cucumis melo var. makuwa]1.0e-13100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

KAG7036778.1 Zinc finger protein CONSTANS, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-13100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

XP_004491763.1 zinc finger protein CONSTANS-LIKE 2 [Cicer arietinum]1.0e-13100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

TrEMBL top hitse value%identityAlignment
A0A072TWC7 Putative transcription factor C2C2-CO-like family4.8e-14100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

A0A151UAZ1 Zinc finger protein CONSTANS-LIKE 24.8e-14100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

A0A1S3TWN2 zinc finger protein CONSTANS-LIKE 24.8e-14100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

A0A7J6GSY5 Uncharacterized protein4.8e-14100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

B9MSS5 CONSTANS protein4.8e-14100Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

SwissProt top hitse value%identityAlignment
O50055 Zinc finger protein CONSTANS-LIKE 13.6e-1491.3Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKK RKFEKTIRYASRKAYAE RPRIKGRFAK+ DV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

O82117 Zinc finger protein CO34.7e-1491.11Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD
        REARV RYREK+KTR+FEKTIRYASRKAYAETRPRIKGRFAKR+D
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD

Q940T9 Zinc finger protein CONSTANS-LIKE 43.6e-1491.11Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD
        REARV+RYREK+K RKFEKTIRYASRKAYAE RPRIKGRFAKRTD
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD

Q9FHH8 Zinc finger protein CONSTANS-LIKE 53.6e-1491.11Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD
        REARVLRYREK+K RKFEKTIRYASRKAYAE+RPRIKGRFAKRT+
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD

Q9SK53 Zinc finger protein CONSTANS-LIKE 32.1e-1493.33Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD
        REARVLRYREK+K RKFEKTIRYASRKAYAE RPRIKGRFAKRTD
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD

Arabidopsis top hitse value%identityAlignment
AT2G24790.1 CONSTANS-like 31.5e-1593.33Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD
        REARVLRYREK+K RKFEKTIRYASRKAYAE RPRIKGRFAKRTD
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD

AT3G02380.1 CONSTANS-like 25.7e-1591.11Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD
        REARVLRYREKKKTRKF+KTIRYASRKAYAE RPRIKGRFAKR +
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD

AT5G15850.1 CONSTANS-like 12.5e-1591.3Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
        REARVLRYREKKK RKFEKTIRYASRKAYAE RPRIKGRFAK+ DV
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV

AT5G24930.1 CONSTANS-like 42.5e-1591.11Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD
        REARV+RYREK+K RKFEKTIRYASRKAYAE RPRIKGRFAKRTD
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD

AT5G57660.1 CONSTANS-like 52.5e-1591.11Show/hide
Query:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD
        REARVLRYREK+K RKFEKTIRYASRKAYAE+RPRIKGRFAKRT+
Subjt:  REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAGAAGCCCGAGTTCTCCGCTACAGAGAGAAGAAGAAGACCAGAAAATTCGAGAAGACGATCCGATACGCCTCCAGAAAGGCCTACGCCGAGACCCGGCCCAGAATCAA
GGGCCGGTTCGCCAAACGAACCGATGTC
mRNA sequenceShow/hide mRNA sequence
AGAGAAGCCCGAGTTCTCCGCTACAGAGAGAAGAAGAAGACCAGAAAATTCGAGAAGACGATCCGATACGCCTCCAGAAAGGCCTACGCCGAGACCCGGCCCAGAATCAA
GGGCCGGTTCGCCAAACGAACCGATGTC
Protein sequenceShow/hide protein sequence
REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV