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MS014552 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014552
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein S7
Genome locationscaffold553:819721..819834
RNA-Seq ExpressionMS014552
SyntenyMS014552
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEN56109.1 ribosomal protein S7 [Cucumis melo subsp. melo]1.2e-09100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

BBN69458.1 Tudor/PWWP/MBT superfamily protein [Prunus dulcis]1.2e-09100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

CAB4277236.1 unnamed protein product [Prunus armeniaca]1.2e-09100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

KAF3452152.1 hypothetical protein FNV43_RR08250 [Rhamnella rubrinervis]1.2e-09100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

YP_009241662.1 ribosomal protein S7 [Ziziphus jujuba]1.2e-09100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

TrEMBL top hitse value%identityAlignment
A0A142BZ01 Ribosomal protein S76.0e-10100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

A0A5D3DUQ4 Ribosomal protein S7 (Mitochondrion)6.0e-10100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

A0A6J5XA11 Ribosomal_S7 domain-containing protein6.0e-10100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

A0A7D6C7C9 Ribosomal protein S76.0e-10100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

G3EU25 Ribosomal protein S76.0e-10100Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

SwissProt top hitse value%identityAlignment
P26867 Ribosomal protein S7, mitochondrial6.6e-0664.71Show/hide
Query:  FAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        +AEIL+A +K GIARKKR++LH+LA  NRSF+H+
Subjt:  FAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

P92557 Ribosomal protein S7, mitochondrial3.4e-1088.57Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAY+KRG AR+KRENLH LASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

Q01902 Ribosomal protein S7, mitochondrial5.2e-1191.43Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAYRKRGI+RK+RENLH LASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

Q748Y7 30S ribosomal protein S75.6e-0565.62Show/hide
Query:  EILDAYRKRGIARKKRENLHRLASTNRSFAHF
        EILDAY  RG A KKRE+ HR+A  NR+FAH+
Subjt:  EILDAYRKRGIARKKRENLHRLASTNRSFAHF

Q9MF82 Ribosomal protein S7, mitochondrial1.7e-0988.24Show/hide
Query:  FAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        F EILDAYRKRGI+RKKRENLH LAS NRSFAHF
Subjt:  FAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein2.4e-1188.57Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAY+KRG AR+KRENLH LASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF

ATMG01270.1 mitochondrial ribosomal protein S72.4e-1188.57Show/hide
Query:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF
        SFAEILDAY+KRG AR+KRENLH LASTNRSFAHF
Subjt:  SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATTTGCTGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGAGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCACGGG
CCCC
mRNA sequenceShow/hide mRNA sequence
TCATTTGCTGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGAGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCACGGG
CCCC
Protein sequenceShow/hide protein sequence
SFAEILDAYRKRGIARKKRENLHRLASTNRSFAHFTGP