; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014567 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014567
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionU3 small nucleolar ribonucleoprotein protein IMP3
Genome locationscaffold553:942051..944161
RNA-Seq ExpressionMS014567
SyntenyMS014567
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005840 - ribosome (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0034457 - Mpp10 complex (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0030515 - snoRNA binding (molecular function)
InterPro domainsIPR001912 - Ribosomal protein S4/S9, N-terminal
IPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041194.1 U3 small nucleolar ribonucleoprotein IMP3-like isoform X1 [Cucumis melo var. makuwa]7.8e-9495.63Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYH+TGRDDYKKYSSLCR VQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_004153543.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucumis sativus]1.0e-9395.08Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYH+TGRDDYKKYSSLCR VQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_022155080.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Momordica charantia]2.0e-97100Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_022955364.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Cucurbita moschata]2.3e-9395.08Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHRE QVM RYH+TGRDDYKKYSS+CR VQKLVSMLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

XP_038880355.1 U3 small nucleolar ribonucleoprotein protein IMP3 [Benincasa hispida]3.0e-9394.54Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYH+TGRDDYKKYSSLCR VQKLV+MLKKMN+KDPFRLE+TEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

TrEMBL top hitse value%identityAlignment
A0A0A0KZG3 S4 RNA-binding domain-containing protein5.0e-9495.08Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYH+TGRDDYKKYSSLCR VQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRK+LQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A5D3BRX0 U3 small nucleolar ribonucleoprotein IMP3-like isoform X13.8e-9495.63Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYH+TGRDDYKKYSSLCR VQKLV+MLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A5D3DJI4 U3 small nucleolar ribonucleoprotein IMP3-like isoform X11.9e-9395.08Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHREAQVM RYH+TGRDDYKKYSSLCR VQKLV+MLKKMNEKDPFR ELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYND+LDDYDA+NC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A6J1DLF0 U3 small nucleolar ribonucleoprotein protein IMP39.7e-98100Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

A0A6J1GW22 U3 small nucleolar ribonucleoprotein protein IMP31.1e-9395.08Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LKFHEQKLLKKVNFLEWKREGGHRE QVM RYH+TGRDDYKKYSS+CR VQKLVSMLKKMNEKDPFRLELTEKLLEKLYN+GVIPTRQSLNLCDRLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC
        VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETV DPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDD+DAMNC
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC

SwissProt top hitse value%identityAlignment
O13835 U3 small nucleolar ribonucleoprotein protein imp35.2e-4848.09Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKR-EGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDR
        MR LK HEQKLL+KV+FL +K  +  HR+  VM+RYH++ R++Y+KY+ +C + ++L   L  ++  DPFRL+    LLEKL+++G++P++  + ++ ++
Subjt:  MRQLKFHEQKLLKKVNFLEWKR-EGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDR

Query:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM
         +VS+ CRRRL  ++ +L+ ++ + EA   IEQGH+RVGP  +TDPA+LVTR++EDF+TW D+SKIKR + +YNDKLDDYD +
Subjt:  LSVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM

P32899 U3 small nucleolar ribonucleoprotein protein IMP33.8e-5151.67Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDRL
        +R+LK HEQKLLKKV+FLEWK++ GHR+ QVM+ YH+  R+DY KY+ +C  +++L + L  +   DPFR +  + LL+KLY +GV+ T+  + +L +++
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSL-NLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        +VS+ CRRRL  ++ RLK AE +++AV +IEQGH+RVGP  + DPA+LVTRNMED++TWVD+SKIK+ +L+Y +++DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q3T0M3 U3 small nucleolar ribonucleoprotein protein IMP31.3e-5456.67Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWK-REGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +R+LKFHEQKLLK+V+FL W+  +    E +V++RY +  R+DY +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR S  LCD +
Subjt:  MRQLKFHEQKLLKKVNFLEWK-REGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q921Y2 U3 small nucleolar ribonucleoprotein protein IMP34.4e-5556.67Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWK-REGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +R+LKFHEQKLLK+V+FL W+  +    E +V++RY +  R++Y +Y+ L R V++L   L+ + E+DPFR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRQLKFHEQKLLKKVNFLEWK-REGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        S SSFCRRRL T+L++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Q9NV31 U3 small nucleolar ribonucleoprotein protein IMP31.7e-5456.67Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWK-REGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL
        +R+LKFHEQKLLK+V+FL W+  +    E +V++RY +  R+DY +Y+ L R V++L   L+ + E+D FR+  +  LL+KLY +G++PTR SL LCD +
Subjt:  MRQLKFHEQKLLKKVNFLEWK-REGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRL

Query:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD
        + SSFCRRRL TVL++L+ A+HL+ AV ++EQGH+RVGP+ VTDPAFLVTR+MEDF+TWVDSSKIKR VL+YN++ DD+D
Subjt:  SVSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYD

Arabidopsis top hitse value%identityAlignment
AT5G15200.1 Ribosomal protein S45.9e-0725Show/hide
Query:  WKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +      R++     L  ++EK P R+   E LL ++   G++   Q+ L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQS-LNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSS
        A+ +  +   I Q HIRVG + V  P+F+V  + +  I +  +S
Subjt:  AEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSS

AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein4.5e-7976.8Show/hide
Query:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS
        MR+LK+HE+KL+KKVNFLEWKREG HRE ++  RYH+  RDDYKKYS LCR VQKL +++K+M+  DPFR+++T+ LLEKLYN+GVIPTR+SL L +RLS
Subjt:  MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLS

Query:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM
        VSSFCRRRLSTVLV LKFAEH +EAVTYIEQGH+RVGPET+TDPAFLVTRNMEDFITWVDSSKIKRKVL+YND LDDYD +
Subjt:  VSSFCRRRLSTVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAM

AT5G39850.1 Ribosomal protein S44.5e-0726.92Show/hide
Query:  WKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF
        +++E    E +++  Y +  + +  +      R++     L  ++EK+P R+   E LL ++   G++  T+  L+    L+V +F  RRL T++ +   
Subjt:  WKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVI-PTRQSLNLCDRLSVSSFCRRRLSTVLVRLKF

Query:  AEHLREAVTYIEQGHIRVGPETVTDPAFLV
        A+ +  A   I Q HIRVG + V  P+F+V
Subjt:  AEHLREAVTYIEQGHIRVGPETVTDPAFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAGCTAAAATTTCACGAGCAGAAGCTGTTGAAGAAGGTTAACTTCTTGGAATGGAAGAGAGAAGGAGGTCACAGAGAAGCCCAGGTCATGCAGCGGTATCACGT
CACTGGACGGGACGATTACAAAAAGTATTCGAGCTTGTGCCGGAGGGTTCAGAAGCTGGTTAGCATGTTGAAGAAGATGAACGAGAAGGACCCTTTTCGATTGGAGTTGA
CTGAGAAGCTTCTTGAAAAGCTGTACAATATTGGTGTGATACCGACCCGACAAAGCTTGAATTTATGTGACCGCTTGTCAGTGTCATCCTTTTGCAGACGGAGGCTATCG
ACGGTGTTGGTACGTTTGAAGTTTGCGGAGCACCTGAGGGAAGCTGTTACATACATCGAGCAAGGGCACATCAGAGTAGGTCCAGAGACAGTTACTGACCCAGCATTCCT
AGTTACAAGAAATATGGAGGACTTCATAACATGGGTTGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTTGATGATTATGATGCCATGAACTGC
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAGCTAAAATTTCACGAGCAGAAGCTGTTGAAGAAGGTTAACTTCTTGGAATGGAAGAGAGAAGGAGGTCACAGAGAAGCCCAGGTCATGCAGCGGTATCACGT
CACTGGACGGGACGATTACAAAAAGTATTCGAGCTTGTGCCGGAGGGTTCAGAAGCTGGTTAGCATGTTGAAGAAGATGAACGAGAAGGACCCTTTTCGATTGGAGTTGA
CTGAGAAGCTTCTTGAAAAGCTGTACAATATTGGTGTGATACCGACCCGACAAAGCTTGAATTTATGTGACCGCTTGTCAGTGTCATCCTTTTGCAGACGGAGGCTATCG
ACGGTGTTGGTACGTTTGAAGTTTGCGGAGCACCTGAGGGAAGCTGTTACATACATCGAGCAAGGGCACATCAGAGTAGGTCCAGAGACAGTTACTGACCCAGCATTCCT
AGTTACAAGAAATATGGAGGACTTCATAACATGGGTTGATTCATCAAAGATAAAGAGAAAGGTTCTACAATACAATGATAAGCTTGATGATTATGATGCCATGAACTGC
Protein sequenceShow/hide protein sequence
MRQLKFHEQKLLKKVNFLEWKREGGHREAQVMQRYHVTGRDDYKKYSSLCRRVQKLVSMLKKMNEKDPFRLELTEKLLEKLYNIGVIPTRQSLNLCDRLSVSSFCRRRLS
TVLVRLKFAEHLREAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFITWVDSSKIKRKVLQYNDKLDDYDAMNC