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MS014579 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014579
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold553:1041949..1042320
RNA-Seq ExpressionMS014579
SyntenyMS014579
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607014.1 Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0550Show/hide
Query:  AMVVAVTVAVLFLTLGANNCNAAPLSPSNFGDEFVAVSASMWCNDRIEECLTGEDGVESA
        A ++A   A++ LTL A+N NAA LS SNFG+E  A + S WC+ R EECL G+D V+ +
Subjt:  AMVVAVTVAVLFLTLGANNCNAAPLSPSNFGDEFVAVSASMWCNDRIEECLTGEDGVESA

KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1340.8Show/hide
Query:  ASNTGVAMVVAVTVA--VLFLTLGANNCNAAPLSPSNFGDEFVAVSASMWCNDRIEECLTGEDGVESAFPSLQSGSP-YTTPQTGQPETPICNRPKDNYG
        +SN+G  M  A   A  V  L L  ++C+ A  +PS++G+  VA +ASMWC+ R+EEC+T ED  ESAFPSL + +P + +  T     P+C RP D Y 
Subjt:  ASNTGVAMVVAVTVA--VLFLTLGANNCNAAPLSPSNFGDEFVAVSASMWCNDRIEECLTGEDGVESAFPSLQSGSP-YTTPQTGQPETPICNRPKDNYG

Query:  PCLQNPRPIKINEHCGDVYARNRAC
         C    R    N++CG      RAC
Subjt:  PCLQNPRPIKINEHCGDVYARNRAC

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1240.87Show/hide
Query:  ASNTGVAMVVAVTVAVLFLTLGANNCNAAPLSPSNFGDEFVAVSASMWCNDRIEECLTGEDGVESAFPSLQSGS-PYTTPQTGQPETPICNRPKDNYGPC
        +SN+G  ++ A  + V  L L  ++CN A  +PS++G+  VA +ASMWC+ R+EEC+T E    SAFPSLQ+ +  Y +P +      +C RP D Y  C
Subjt:  ASNTGVAMVVAVTVAVLFLTLGANNCNAAPLSPSNFGDEFVAVSASMWCNDRIEECLTGEDGVESAFPSLQSGS-PYTTPQTGQPETPICNRPKDNYGPC

Query:  LQNPRPIKIN-EHCG
          NPR    N  +CG
Subjt:  LQNPRPIKIN-EHCG

KGN57814.1 hypothetical protein Csa_009509 [Cucumis sativus]6.0e-0537.7Show/hide
Query:  ASNTGVAM-------VVAVTVAVLFLTLGANNCNAAPLSPSNFGDE-FVAVSASMWCNDRIEECLTG--EDGVE-SAFPSLQSGSPYTTPQTGQPETPIC
        +SNT  +M       +VAV + V+  T+GA++C AA L+ SN G+E   A ++S WCN   +ECL G  +D +E SAFPSL     Y T +T   +  +C
Subjt:  ASNTGVAM-------VVAVTVAVLFLTLGANNCNAAPLSPSNFGDE-FVAVSASMWCNDRIEECLTG--EDGVE-SAFPSLQSGSPYTTPQTGQPETPIC

Query:  NR-PKDNYGPCLQNPRPIKINE
         R  + +   CL   RP  I +
Subjt:  NR-PKDNYGPCLQNPRPIKINE

TrEMBL top hitse value%identityAlignment
A0A0A0LA12 Uncharacterized protein2.9e-0537.7Show/hide
Query:  ASNTGVAM-------VVAVTVAVLFLTLGANNCNAAPLSPSNFGDE-FVAVSASMWCNDRIEECLTG--EDGVE-SAFPSLQSGSPYTTPQTGQPETPIC
        +SNT  +M       +VAV + V+  T+GA++C AA L+ SN G+E   A ++S WCN   +ECL G  +D +E SAFPSL     Y T +T   +  +C
Subjt:  ASNTGVAM-------VVAVTVAVLFLTLGANNCNAAPLSPSNFGDE-FVAVSASMWCNDRIEECLTG--EDGVE-SAFPSLQSGSPYTTPQTGQPETPIC

Query:  NR-PKDNYGPCLQNPRPIKINE
         R  + +   CL   RP  I +
Subjt:  NR-PKDNYGPCLQNPRPIKINE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTTCAAACACCGGAGTTGCAATGGTGGTGGCGGTGACGGTGGCAGTCTTGTTTTTGACGTTGGGTGCCAACAACTGCAATGCTGCTCCTTTAAGTCCTTCAAATTTTGG
TGACGAGTTTGTCGCCGTTTCAGCATCAATGTGGTGCAACGACCGCATTGAAGAATGCCTCACCGGAGAAGATGGCGTGGAGTCGGCATTTCCAAGCCTGCAATCAGGCT
CCCCATACACAACTCCACAAACAGGACAACCTGAGACACCTATATGCAATCGGCCCAAAGACAACTATGGCCCCTGTCTCCAAAACCCACGCCCAATTAAAATTAATGAG
CATTGCGGCGACGTGTACGCTCGAAACCGAGCCTGTCCGTCA
mRNA sequenceShow/hide mRNA sequence
GCTTCAAACACCGGAGTTGCAATGGTGGTGGCGGTGACGGTGGCAGTCTTGTTTTTGACGTTGGGTGCCAACAACTGCAATGCTGCTCCTTTAAGTCCTTCAAATTTTGG
TGACGAGTTTGTCGCCGTTTCAGCATCAATGTGGTGCAACGACCGCATTGAAGAATGCCTCACCGGAGAAGATGGCGTGGAGTCGGCATTTCCAAGCCTGCAATCAGGCT
CCCCATACACAACTCCACAAACAGGACAACCTGAGACACCTATATGCAATCGGCCCAAAGACAACTATGGCCCCTGTCTCCAAAACCCACGCCCAATTAAAATTAATGAG
CATTGCGGCGACGTGTACGCTCGAAACCGAGCCTGTCCGTCA
Protein sequenceShow/hide protein sequence
ASNTGVAMVVAVTVAVLFLTLGANNCNAAPLSPSNFGDEFVAVSASMWCNDRIEECLTGEDGVESAFPSLQSGSPYTTPQTGQPETPICNRPKDNYGPCLQNPRPIKINE
HCGDVYARNRACPS