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MS014580 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014580
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold553:1048052..1048420
RNA-Seq ExpressionMS014580
SyntenyMS014580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]5.8e-0839.34Show/hide
Query:  ATLAAITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSCV
        A +AA       + + M   + C  AS  PS++GN T V AAA M C GR E+C+  EDD ES FPSL+ S  +  +  T +R++P C RP  G Y SC 
Subjt:  ATLAAITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSCV

Query:  GQGRQIPKAQLCSNTNPYNRNC
           R   K   C     Y R C
Subjt:  GQGRQIPKAQLCSNTNPYNRNC

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]5.4e-0635Show/hide
Query:  LAAITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSCVGQ
        +AA  + + I++++    + C  AS  PS++GN+T V AAA M C GR E+C+  E D  S FPSL  S  +  +P + + ++  C RP    Y SC   
Subjt:  LAAITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSCVGQ

Query:  GRQIPKAQLCSNTNPYNRNC
         R  P    C     Y R C
Subjt:  GRQIPKAQLCSNTNPYNRNC

KGN53789.1 hypothetical protein Csa_015152 [Cucumis sativus]6.6e-0433.06Show/hide
Query:  ATLAA-ITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSC
        AT AA  T  + I+I+ + +++ C AAS+ PSNF N+T     + + C+G  +QC   E++    +          +TPRTG R+   C R   G Y  C
Subjt:  ATLAA-ITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSC

Query:  V-GQGRQIPKAQLCSNTNPYNRNC
        +  QG   PK + C +   Y+R C
Subjt:  V-GQGRQIPKAQLCSNTNPYNRNC

TrEMBL top hitse value%identityAlignment
A0A0A0KY59 Uncharacterized protein3.2e-0433.06Show/hide
Query:  ATLAA-ITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSC
        AT AA  T  + I+I+ + +++ C AAS+ PSNF N+T     + + C+G  +QC   E++    +          +TPRTG R+   C R   G Y  C
Subjt:  ATLAA-ITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSC

Query:  V-GQGRQIPKAQLCSNTNPYNRNC
        +  QG   PK + C +   Y+R C
Subjt:  V-GQGRQIPKAQLCSNTNPYNRNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAGCTACATTGGCAGCGATAACGGTGGTGATAGCAATAATGATCATGAACATGAACATGAACGCAAGCTGCATGGCTGCTTCTATAAGGCCTTCCAATTTTGGCAACGA
CACCAATGTCACTGCTGCAGCATTGATGCCGTGCAGTGGCCGCACCGAACAATGCCTCGCCGGAGAAGACGACGTTGAGTCCGTGTTTCCAAGCCTTGTAGGCTCACAGA
ATAGGAAGACCACTCCGAGGACCGGAGACCGGTCTAGACCGACATGTGCTCGGCCGTTGGGTGGAAGATATGGCAGCTGTGTCGGCCAGGGGCGCCAAATTCCCAAGGCA
CAATTATGTAGCAATACCAATCCATATAATCGCAACTGT
mRNA sequenceShow/hide mRNA sequence
CAAGCTACATTGGCAGCGATAACGGTGGTGATAGCAATAATGATCATGAACATGAACATGAACGCAAGCTGCATGGCTGCTTCTATAAGGCCTTCCAATTTTGGCAACGA
CACCAATGTCACTGCTGCAGCATTGATGCCGTGCAGTGGCCGCACCGAACAATGCCTCGCCGGAGAAGACGACGTTGAGTCCGTGTTTCCAAGCCTTGTAGGCTCACAGA
ATAGGAAGACCACTCCGAGGACCGGAGACCGGTCTAGACCGACATGTGCTCGGCCGTTGGGTGGAAGATATGGCAGCTGTGTCGGCCAGGGGCGCCAAATTCCCAAGGCA
CAATTATGTAGCAATACCAATCCATATAATCGCAACTGT
Protein sequenceShow/hide protein sequence
QATLAAITVVIAIMIMNMNMNASCMAASIRPSNFGNDTNVTAAALMPCSGRTEQCLAGEDDVESVFPSLVGSQNRKTTPRTGDRSRPTCARPLGGRYGSCVGQGRQIPKA
QLCSNTNPYNRNC