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MS014608 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014608
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCAP-Gly domain-containing linker protein 1-like
Genome locationscaffold1096:48789..49723
RNA-Seq ExpressionMS014608
SyntenyMS014608
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597517.1 hypothetical protein SDJN03_10697, partial [Cucurbita argyrosperma subsp. sororia]5.9e-3379.82Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDG-HALT
        QDLQNWR KLD QVNTYRSELSELKKSLNVEVE LRTEF ELRTTLQQQQEDVT SLRNLG+QD S DN++T+ QHP+AESSDKE  D  + KDG H LT
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDG-HALT

Query:  EDKGNEAEN
        E KGNEAEN
Subjt:  EDKGNEAEN

XP_004134206.1 CAP-Gly domain-containing linker protein 1 [Cucumis sativus]3.0e-3280.56Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTE
        QDLQNWRSKLD QV+TYRSELSELKKSLNVEVE+LRTEF+ELRTTLQQQQEDVT SLRNLGLQDVS+DN+ETQ QHP+  S DKE  DA+E K  + LTE
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTE

Query:  DKGNEAEN
        +KGNEAEN
Subjt:  DKGNEAEN

XP_022137849.1 uncharacterized protein LOC111009183 [Momordica charantia]3.8e-48100Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTE
        QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTE
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTE

Query:  DKGNEAEN
        DKGNEAEN
Subjt:  DKGNEAEN

XP_022948034.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata]5.9e-3379.82Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDG-HALT
        QDLQNWR KLD QVNTYRSELSELKKSLNVEVE LRTEF ELRTTLQQQQEDVT SLRNLG+QD S DN++T+ QHP+AESSDKE  D  + KDG H LT
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDG-HALT

Query:  EDKGNEAEN
        E KGNEAEN
Subjt:  EDKGNEAEN

XP_023539906.1 CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]3.0e-3278.9Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDG-HALT
        QDLQNWR KLD QVNTYRSELSELKKSLNVEVE LRTEF ELRTTLQQQQEDVT SLRNLG+QD S DN++T+ QHP+AESSDKE  D  + KDG H LT
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDG-HALT

Query:  EDKGNEAEN
        E KGNE EN
Subjt:  EDKGNEAEN

TrEMBL top hitse value%identityAlignment
A0A1S3AY29 CAP-Gly domain-containing linker protein 1 isoform X23.2e-3282.57Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEV-KDGHALT
        QDLQNWRSKLD QVNTYRSELSELKKSLNVEVE+LRTEF+ELRTTLQQQQEDVT SLRNLGLQDVS+D +ETQ QHP A S DKE  DA+E  KDG  LT
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEV-KDGHALT

Query:  EDKGNEAEN
        E+KGNEAEN
Subjt:  EDKGNEAEN

A0A5D3D134 CAP-Gly domain-containing linker protein 1 isoform X23.2e-3282.57Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEV-KDGHALT
        QDLQNWRSKLD QVNTYRSELSELKKSLNVEVE+LRTEF+ELRTTLQQQQEDVT SLRNLGLQDVS+D +ETQ QHP A S DKE  DA+E  KDG  LT
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEV-KDGHALT

Query:  EDKGNEAEN
        E+KGNEAEN
Subjt:  EDKGNEAEN

A0A6J1C8F7 uncharacterized protein LOC1110091831.9e-48100Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTE
        QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTE
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTE

Query:  DKGNEAEN
        DKGNEAEN
Subjt:  DKGNEAEN

A0A6J1G8M8 CAP-Gly domain-containing linker protein 1-like2.9e-3379.82Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDG-HALT
        QDLQNWR KLD QVNTYRSELSELKKSLNVEVE LRTEF ELRTTLQQQQEDVT SLRNLG+QD S DN++T+ QHP+AESSDKE  D  + KDG H LT
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDG-HALT

Query:  EDKGNEAEN
        E KGNEAEN
Subjt:  EDKGNEAEN

A0A6J1GVY7 CAP-Gly domain-containing linker protein 1-like5.4e-3279.82Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANE-VKDGHALT
        QDLQNWRSKLD QVNTYRSELSELKKSLNVEVE+LRTEF+ELRTTLQQQQEDVT SLRNLGLQDVS+DN+ET+ QHP AE S+KE  DA E  K+G   T
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANE-VKDGHALT

Query:  EDKGNEAEN
        E+KGNEA N
Subjt:  EDKGNEAEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15790.1 unknown protein2.2e-1756.52Show/hide
Query:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDND---ETQRQHPIAESSDKEAHDA
        QDLQ+WR KLD QV  YR ELS LKK+LN+EVE LR EF++L+TTL QQQ+DV+ASL++LGLQD     D   E   +   A S+D  A +A
Subjt:  QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDND---ETQRQHPIAESSDKEAHDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGATCTCCAGAATTGGAGGTCAAAACTTGACATGCAAGTTAATACCTACCGCAGTGAACTCTCGGAACTCAAGAAATCGCTAAATGTTGAGGTAGAGAACCTTCGTAC
GGAATTCGAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGATGTGACTGCTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCCATGGACAATGACGAGACTCAAC
GTCAACATCCTATAGCAGAAAGCAGTGACAAGGAAGCACACGACGCAAACGAGGTTAAGGATGGACATGCCTTAACAGAGGACAAGGGGAATGAAGCTGAAAAT
mRNA sequenceShow/hide mRNA sequence
CAGGATCTCCAGAATTGGAGGTCAAAACTTGACATGCAAGTTAATACCTACCGCAGTGAACTCTCGGAACTCAAGAAATCGCTAAATGTTGAGGTAGAGAACCTTCGTAC
GGAATTCGAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGATGTGACTGCTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCCATGGACAATGACGAGACTCAAC
GTCAACATCCTATAGCAGAAAGCAGTGACAAGGAAGCACACGACGCAAACGAGGTTAAGGATGGACATGCCTTAACAGAGGACAAGGGGAATGAAGCTGAAAAT
Protein sequenceShow/hide protein sequence
QDLQNWRSKLDMQVNTYRSELSELKKSLNVEVENLRTEFEELRTTLQQQQEDVTASLRNLGLQDVSMDNDETQRQHPIAESSDKEAHDANEVKDGHALTEDKGNEAEN