CuGenDBv2

Gene ID	MS014613
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	translocator protein homolog
Genome location	scaffold1096:78404..78892
RNA-Seq Expression	MS014613
Synteny	MS014613
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004307 - TspO/MBR-related protein IPR038330 - TspO/MBR-related superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_016898980.1 PREDICTED: translocator protein homolog [Cucumis melo]

8.3e-71

84.76

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        KSRPESKYTKAKRALRSLAVSVAIP+SLTI VIFLFG S RHFPNR+RP+W+ PLW L LSSIGSSFL+GL+AWLVWADGGFHG S ALPLYIAHL+LSV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        VW+PLVLVIR+V++AFLFCVLDF+TLFACYR+F+RVNPFAKDL+KPCLA TAYLSAVTYV IHL
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

XP_022138228.1 translocator protein homolog [Momordica charantia]

5.5e-83

100

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVV
        KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVV

Query:  WNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        WNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
Subjt:  WNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]

1.4e-70

86.59

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        KSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+APLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        VWNPLVLVIRA+LLAFLFCVLDF+TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]

7.0e-70

85.98

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        KSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+APLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        VWNPLVLVIRA+LLAFLFCVLD +TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

XP_038878873.1 translocator protein homolog [Benincasa hispida]

8.9e-73

88.41

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        KSRPESKYTKAKRALRSLAVSVAIPLSLTI VIFLFG S RHFPNR+RP+W+ PLW LHLSSIGSSFLIGL+AWLVWADGGFHG S ALPLYIAHL+LSV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        VWNPLVLVIR+V+LAFLFCVLDF+TLFACYR+FKRVNPFAKDLIKPCLA TAYLSAVTYV I L
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DTF2 translocator protein homolog

4.0e-71

84.76

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        KSRPESKYTKAKRALRSLAVSVAIP+SLTI VIFLFG S RHFPNR+RP+W+ PLW L LSSIGSSFL+GL+AWLVWADGGFHG S ALPLYIAHL+LSV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        VW+PLVLVIR+V++AFLFCVLDF+TLFACYR+F+RVNPFAKDL+KPCLA TAYLSAVTYV IHL
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

A0A5D3CWC4 Translocator protein-like protein

4.0e-71

84.76

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        KSRPESKYTKAKRALRSLAVSVAIP+SLTI VIFLFG S RHFPNR+RP+W+ PLW L LSSIGSSFL+GL+AWLVWADGGFHG S ALPLYIAHL+LSV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        VW+PLVLVIR+V++AFLFCVLDF+TLFACYR+F+RVNPFAKDL+KPCLA TAYLSAVTYV IHL
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

A0A6J1CCG7 translocator protein homolog

2.7e-83

100

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVV
        KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVV

Query:  WNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        WNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
Subjt:  WNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

A0A6J1FZS9 translocator protein homolog

9.9e-70

85.98

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        KSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+APLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        VWNPLVLVIRA LLAFLFCVLD +TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

A0A6J1ICB9 translocator protein homolog

6.9e-71

86.59

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        KSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+APLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSV
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
        VWNPLVLVIRA+LLAFLFCVLDF+TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

SwissProt top hits

e value

%identity

Alignment

O82245 Translocator protein homolog

1.0e-26

39.13

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSR-PVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        K + + K   AKR L+SL V+VA P+ +T+   +  G+   + NR++   W+ PLW LH + + SS L+GL+AWLVW DGGFH    AL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSR-PVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVL
        VW+P+   + + +      +     LF CY++F  ++P A +L+KPCLA  A+++AV   L
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVL

Arabidopsis top hits

e value

%identity

Alignment

AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related

7.1e-28

39.13

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Query:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSR-PVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV
        K + + K   AKR L+SL V+VA P+ +T+   +  G+   + NR++   W+ PLW LH + + SS L+GL+AWLVW DGGFH    AL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSR-PVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSV

Query:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVL
        VW+P+   + + +      +     LF CY++F  ++P A +L+KPCLA  A+++AV   L
Subjt:  VWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVL

Sequences

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CDS sequence

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AAATCCAGGCCAGAATCCAAGTACACCAAGGCCAAGAGGGCGCTCCGGTCCCTCGCCGTCTCCGTCGCCATTCCCCTGTCTCTCACCATCACCGTCATCTTCCTCTTCGG
CTCCGGCCGCCATTTCCCCAATCGGAGCCGCCCGGTGTGGATGGCGCCGCTCTGGTTCCTCCATCTATCGTCGATCGGCTCCTCCTTCCTGATCGGGCTCTCCGCCTGGC
TCGTGTGGGCCGACGGCGGATTTCACGGCAATTCCACCGCCCTGCCGCTCTACATCGCGCATCTCGCCCTCAGCGTCGTCTGGAATCCTCTGGTACTCGTGATTCGCGCC
GTTCTGCTTGCGTTTCTGTTCTGTGTTTTGGATTTCATTACTCTGTTTGCCTGTTATCGGAGCTTCAAGCGAGTGAATCCGTTCGCTAAGGATCTGATTAAGCCCTGTTT
GGCTTCCACTGCGTATCTCTCTGCAGTCACTTACGTGTTGATTCATCTT

mRNA sequence

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Protein sequence

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KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRA
VLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

MS014613 (gene) of Bitter gourd (TR) v1 genome