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MS014623 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014623
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC103483850
Genome locationscaffold1096:139350..139706
RNA-Seq ExpressionMS014623
SyntenyMS014623
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134216.1 uncharacterized protein LOC101205160 [Cucumis sativus]3.1e-5190.76Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH ILLAVVVA+VIVVPF+ GDQGEA+T+AISDLLSPFGLLLLP++LLL IQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
XP_022137815.1 uncharacterized protein LOC111009160 [Momordica charantia]2.1e-55100Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
XP_023528270.1 uncharacterized protein LOC111791239 [Cucurbita pepo subsp. pepo]5.9e-5089.08Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHG++LAVVVA VI+VPF  GD GEA+TEAISDLLSPFGLLLLP++LLL IQFLSSDRGS VSAIFST EPDSIHRVTGSPVGVALFLLLI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
XP_028786850.1 uncharacterized protein LOC114742804 [Prosopis alba]1.6e-5086.55Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHGILLA+VVA+V++VPF+ GDQGEA+TEAIS+LLSP GLLLLP+ILLL IQFLSSDRGSF+S++FSTGEPDSIHRV+GSPVGVALFLLLI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNR+SIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
XP_038899735.1 uncharacterized protein LOC120086972 [Benincasa hispida]7.0e-5190.76Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH ILLAVVVA+VIVVPF+ GDQGEA+TEAISDLLSP GLLLLP++LLL IQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
TrEMBL top hitse value%identityAlignment
A0A0A0L5U0 Uncharacterized protein1.5e-5190.76Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH ILLAVVVA+VIVVPF+ GDQGEA+T+AISDLLSPFGLLLLP++LLL IQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
A0A1S3AY58 LOW QUALITY PROTEIN: uncharacterized protein LOC1034838501.5e-5190.76Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH ILLAVVVA+VIVVPF+ GDQGEA+T+AISDLLSPFGLLLLP++LLL IQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
A0A5A7U157 Uncharacterized protein1.5e-5190.76Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH ILLAVVVA+VIVVPF+ GDQGEA+T+AISDLLSPFGLLLLP++LLL IQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
A0A6J1C7Q9 uncharacterized protein LOC1110091601.0e-55100Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
A0A6J1I8A7 uncharacterized protein LOC1114722944.9e-5090.76Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHG+LLAVVVA+VIV PF+ GD GEA+TEAISDLLSPFGLLLLP++LLLAIQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31940.1 unknown protein6.2e-0530.56Show/hide
Query:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLL--PVILLLAIQFLSSDR--GSFVSAIFSTGEPDSIHRVTGSPVGVALF
        M  +++G  P  + L + V V+I++ FV      +    I      F L L+  P++LLLA+ FLS D+  G  ++++    E +S++R  G+P GVA  
Subjt:  MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLL--PVILLLAIQFLSSDR--GSFVSAIFSTGEPDSIHRVTGSPVGVALF

Query:  LLLILFLL
        L+ + F++
Subjt:  LLLILFLL
AT3G06890.1 unknown protein8.0e-4579.65Show/hide
Query:  GGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLILFLLYN
        G APHGI+LAVVVA+V++VPF  GD GEA+T+AI++LLSP GLLLLP+ILLL IQFLSS+RGSFVSAIFSTGEP+SIHRV+GSPVGVALFL+LILFLLY 
Subjt:  GGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLILFLLYN

Query:  RISIFGGDDDSGD
        R SIFGGDD S D
Subjt:  RISIFGGDDDSGD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAAGAACGGCAAGGCGGCGCTCCCCACGGCATTCTGCTGGCGGTCGTCGTCGCCGTCGTGATCGTCGTTCCGTTCGTCTTCGGCGACCAAGGCGAGGCCGTCAC
CGAAGCCATCTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTTCCCGTCATCCTCCTCCTCGCCATCCAGTTCCTCTCCTCCGACCGCGGCTCCTTCGTCTCCGCCA
TCTTCTCCACCGGCGAGCCTGATTCCATCCACCGCGTCACTGGATCGCCCGTCGGCGTCGCTCTCTTCCTCCTCCTCATTCTCTTCCTCCTCTACAATCGCATTTCGATC
TTCGGCGGCGACGATGACTCCGGCGAC
mRNA sequenceShow/hide mRNA sequence
ATGATAGAAGAACGGCAAGGCGGCGCTCCCCACGGCATTCTGCTGGCGGTCGTCGTCGCCGTCGTGATCGTCGTTCCGTTCGTCTTCGGCGACCAAGGCGAGGCCGTCAC
CGAAGCCATCTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTTCCCGTCATCCTCCTCCTCGCCATCCAGTTCCTCTCCTCCGACCGCGGCTCCTTCGTCTCCGCCA
TCTTCTCCACCGGCGAGCCTGATTCCATCCACCGCGTCACTGGATCGCCCGTCGGCGTCGCTCTCTTCCTCCTCCTCATTCTCTTCCTCCTCTACAATCGCATTTCGATC
TTCGGCGGCGACGATGACTCCGGCGAC
Protein sequenceShow/hide protein sequence
MIEERQGGAPHGILLAVVVAVVIVVPFVFGDQGEAVTEAISDLLSPFGLLLLPVILLLAIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLILFLLYNRISI
FGGDDDSGD