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MS014626 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014626
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description3-ketoacyl-CoA synthase
Genome locationscaffold1096:146012..146173
RNA-Seq ExpressionMS014626
SyntenyMS014626
Gene Ontology termsGO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QCE13276.1 chalcone synthase [Vigna unguiculata]2.2e-0451.02Show/hide
Query:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
        S+IC K++ T R  ++  N NHAF+H CIH+ GR  IQ +ETNLRL ++
Subjt:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
XP_020221060.1 probable 3-ketoacyl-CoA synthase 21 [Cajanus cajan]8.4e-0446.94Show/hide
Query:  SLICSKLFITRK-GVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
        S++C KL+  R+  ++  N NHAF+H CIH+ GR  IQ +E NLRL ++
Subjt:  SLICSKLFITRK-GVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
XP_027905184.1 probable 3-ketoacyl-CoA synthase 21 [Vigna unguiculata]2.2e-0451.02Show/hide
Query:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
        S+IC K++ T R  ++  N NHAF+H CIH+ GR  IQ +ETNLRL ++
Subjt:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
TrEMBL top hitse value%identityAlignment
A0A0L9TBI0 3-ketoacyl-CoA synthase7.0e-0446.94Show/hide
Query:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
        S++C K++ T R  ++  N NHAF+H CIH+ GR  IQ +E NLRL ++
Subjt:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
A0A151T5W8 3-ketoacyl-CoA synthase4.1e-0446.94Show/hide
Query:  SLICSKLFITRK-GVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
        S++C KL+  R+  ++  N NHAF+H CIH+ GR  IQ +E NLRL ++
Subjt:  SLICSKLFITRK-GVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
A0A1S3TYX8 3-ketoacyl-CoA synthase5.3e-0448.98Show/hide
Query:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
        S+IC K++ T R  ++  N NHAF+H CIH+ GR  IQ +E NLRL ++
Subjt:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
A0A4D6NHY2 Very-long-chain 3-oxoacyl-CoA synthase1.1e-0451.02Show/hide
Query:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
        S+IC K++ T R  ++  N NHAF+H CIH+ GR  IQ +ETNLRL ++
Subjt:  SLICSKLFIT-RKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16280.1 3-ketoacyl-CoA synthase 91.8e-0440.43Show/hide
Query:  SLICSKLFITRKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLER
        +L+  KLF ++   +I +   AFDH CIH  GR  I ++E NL+L +
Subjt:  SLICSKLFITRKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLER
AT5G49070.1 3-ketoacyl-CoA synthase 216.9e-0444.68Show/hide
Query:  LICSKLFITRKGVFIT-NSNHAFDHLCIHTKGRVRIQDIETNLRLER
        ++C KL I       T N   AF+H CIHT GR  IQ +E NL+L +
Subjt:  LICSKLFITRKGVFIT-NSNHAFDHLCIHTKGRVRIQDIETNLRLER

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTATAGCATGGAGGGCTTCGCTAATTTGTTCAAAACTATTTATCACAAGGAAAGGCGTATTCATAACAAACTCCAATCATGCTTTTGACCACTTATGTATCCATACTAA
GGGGAGAGTTCGAATTCAAGACATCGAAACAAACCTACGGTTGGAAAGAAAG
mRNA sequenceShow/hide mRNA sequence
CTTATAGCATGGAGGGCTTCGCTAATTTGTTCAAAACTATTTATCACAAGGAAAGGCGTATTCATAACAAACTCCAATCATGCTTTTGACCACTTATGTATCCATACTAA
GGGGAGAGTTCGAATTCAAGACATCGAAACAAACCTACGGTTGGAAAGAAAG
Protein sequenceShow/hide protein sequence
LIAWRASLICSKLFITRKGVFITNSNHAFDHLCIHTKGRVRIQDIETNLRLERK