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MS014634 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014634
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionOligouridylate binding protein 1B isoform 1
Genome locationscaffold1096:209473..209624
RNA-Seq ExpressionMS014634
SyntenyMS014634
Gene Ontology termsGO:0006506 - GPI anchor biosynthetic process (biological process)
GO:0097056 - selenocysteinyl-tRNA(Sec) biosynthetic process (biological process)
GO:0097502 - mannosylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004376 - glycolipid mannosyltransferase activity (molecular function)
GO:0004828 - serine-tRNA ligase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0051751 - alpha-1,4-mannosyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KEH31556.1 hypothetical protein MTR_4g098835 [Medicago truncatula]9.7e-0780.56Show/hide
Query:  AFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        A PRGEPFQKFSKA+ +PRPKRGFGNSFQPAI + R
Subjt:  AFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
OMO87319.1 hypothetical protein CCACVL1_09133 [Corchorus capsularis]2.2e-0681.08Show/hide
Query:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        RA PR EPFQKFSKAR +PRPKRGFGNSFQPAI + R
Subjt:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
RHN63126.1 hypothetical protein MtrunA17_Chr4g0054911 [Medicago truncatula]2.8e-0677.78Show/hide
Query:  AFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        A P+GEPFQKFSKA+ +PRPKRGFGNSFQPAI + R
Subjt:  AFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
RZC28174.1 hypothetical protein D0Y65_000267 [Glycine soja]2.2e-0681.08Show/hide
Query:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        RA P  EPFQKFSKAR EPRPKRGFGNSFQPAI + R
Subjt:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
XP_010554445.1 PREDICTED: uncharacterized protein LOC104824164 isoform X1 [Tarenaya hassleriana]9.7e-0781.08Show/hide
Query:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        RA PR EPFQKFSKAR EPRP+RGFGNSFQPAI + R
Subjt:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
TrEMBL top hitse value%identityAlignment
A0A072UQC1 Uncharacterized protein4.7e-0780.56Show/hide
Query:  AFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        A PRGEPFQKFSKA+ +PRPKRGFGNSFQPAI + R
Subjt:  AFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
A0A1R3IXK6 Uncharacterized protein1.0e-0681.08Show/hide
Query:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        RA PR EPFQKFSKAR +PRPKRGFGNSFQPAI + R
Subjt:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
A0A396IC08 Uncharacterized protein1.4e-0677.78Show/hide
Query:  AFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        A P+GEPFQKFSKA+ +PRPKRGFGNSFQPAI + R
Subjt:  AFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
A0A445LY15 Uncharacterized protein1.0e-0681.08Show/hide
Query:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        RA P  EPFQKFSKAR EPRPKRGFGNSFQPAI + R
Subjt:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
A0A6A3A274 Oligouridylate binding protein 1B isoform 11.4e-0678.38Show/hide
Query:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
        RA PR EPF+KFSKAR +PRPKRGFGNSFQPAI + R
Subjt:  RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGCTTTCCCCCGAGGGGAGCCCTTCCAGAAATTCTCGAAGGCCAGGGGCGAGCCCAGGCCTAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATTGCCTCGGTTAG
AACCTCACTAGCTGCGTCATTGCCCCAAGCGCAAAGA
mRNA sequenceShow/hide mRNA sequence
AGGGCTTTCCCCCGAGGGGAGCCCTTCCAGAAATTCTCGAAGGCCAGGGGCGAGCCCAGGCCTAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAATTGCCTCGGTTAG
AACCTCACTAGCTGCGTCATTGCCCCAAGCGCAAAGA
Protein sequenceShow/hide protein sequence
RAFPRGEPFQKFSKARGEPRPKRGFGNSFQPAIASVRTSLAASLPQAQR