; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014656 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014656
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
Genome locationscaffold1315:13770..14444
RNA-Seq ExpressionMS014656
SyntenyMS014656
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145469.1 glycine-rich cell wall structural protein 1.8-like isoform X1 [Momordica charantia]9.7e-5480.44Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA
        MA  +  SL FLLL+G GLASAARTLL ++P  ++     YDR     +VGYD +HHD   GAYGGG+GGGYG+G GS+LGGSGYGSGGGGGGGSGYGGA
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA

Query:  RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGPGEHGAGYGSG
         DHG GYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSG GYGD  GRGKGYGSG GGGSGYGGGGDHGAGYGSGGGGGYGSGGGGG GYGPGEHG GYGSG
Subjt:  RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGPGEHGAGYGSG

Query:  GGGGSGGGYGGSKGGYGGGSGSGKG
        GGGGSGGGYGGSKGGYGGGSG GKG
Subjt:  GGGGSGGGYGGSKGGYGGGSGSGKG

XP_022145473.1 glycine-rich cell wall structural protein 2-like [Momordica charantia]5.7e-6292.82Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA
        MANPRILSLGFLLLVGLGLASAAR LLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA

Query:  RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSG
        RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGG G GG      GYGS G GGY  G
Subjt:  RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSG

XP_023005512.1 glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima]1.3e-4274.89Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGY--GSGTGSALGGSGYGSGGGGGGGSGYG
        MA  + LSL FLLL+GLGLASAARTLL+YDPPHHS VGY Y     NP+VGYD +HHD PYGAYGGG+GGGY  G+G GSALGGSGYGSGGGGGGGSGY 
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGY--GSGTGSALGGSGYGSGGGGGGGSGYG

Query:  GARD-HGAGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGP-GEHGA
        G  D  G+GYGSGGGGG G G G  G  G GYGSGGGGGSG GYGD+ G GKGYGSG GGGSGYGGG DHG GYGSGGGGGYG+GGG   GYGP G+HG 
Subjt:  GARD-HGAGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGP-GEHGA

Query:  GYGSGGGGGSGGGYGGSKGGYGGG-SGSGKG
        GYGSGGGGGSGGGYGG   GYGGG  G G G
Subjt:  GYGSGGGGGSGGGYGGSKGGYGGG-SGSGKG

XP_023539508.1 glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]5.4e-4475.55Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA
        MA  + LSL FLLL+GLGLASAARTLL+YDPPHHS VGY Y     NP+VGYD +HHD PYGAYGGG+GGGYG+G GSALGGSGYGSGGGGGGGSGY G 
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA

Query:  RD-HGAGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGP-GEHGAGY
         D  G+GYGSGGGGG G G G  G  G GYGSGGGGGSG GYGD+ G GKGYGSG GGGSGYGGG DHG GYGSGGGGGYG+GGG   GYGP G+ G GY
Subjt:  RD-HGAGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGP-GEHGAGY

Query:  GSGGGGGSGGGYGGSKGGYGGGS-GSGKG
        GSGGGGGSGGGYGG   GYGGG+ GSG G
Subjt:  GSGGGGGSGGGYGGSKGGYGGGS-GSGKG

XP_038905926.1 glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]3.0e-4778.51Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYD-PPHHSAVGYD-YDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYG
        MA  R LS GFLLLVGLGLASA R LL+YD PPH S  GYD YD PV NPKVGY+ +HHD   G YGGGAGGGYG G GS+LGGSGYGS  GGGGGSGY 
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYD-PPHHSAVGYD-YDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYG

Query:  GARDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGPG-EHGAGY
        GA DHG GYGSGGGGGYG G+GS LGG+GYGSGGGGGSG GYGD+ G GKGYGSG GGGSGYGG GDHG GYGSGGGGGYGSGGG   GYGPG EHG GY
Subjt:  GARDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGPG-EHGAGY

Query:  GSGGGGGSGGGYGGSKGGYGGGSGSGKG
        GSGGGGGSG GYGGSK GYGGGSG G G
Subjt:  GSGGGGGSGGGYGGSKGGYGGGSGSGKG

TrEMBL top hitse value%identityAlignment
A0A0A0L1U7 Uncharacterized protein1.6e-4172.38Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYD-PPHHSAVGYD-YDRPVLNPKVGY----------DPEHHDRPYGAYGGGAGGGY--GSGTGSALGGSGYG
        MA  + LS GFLLLV LGLASAAR+LL+YD PPH S  GYD YD PV+NPKVGY          D +HHD P   YGGGAGGGY  G+G GS+LGGSGYG
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYD-PPHHSAVGYD-YDRPVLNPKVGY----------DPEHHDRPYGAYGGGAGGGY--GSGTGSALGGSGYG

Query:  SGGGGGGGSGYGGARDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGP
        S  GGGGGSGYGG  +H  GYGSGGGGGYG G+GS LGG+GYGSGGGGGSG GYGD+ GRGKGYGSG GGGSGYGG GDHG GYGSGGGGGYGSG GGG 
Subjt:  SGGGGGGGSGYGGARDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGP

Query:  GYGPGEHGAGYGSGGGGGSGGGYGGSKGGYGGGSGSGKG
        G    +HG GYGSGGGGG+G GYGGSK GYGGGSG G G
Subjt:  GYGPGEHGAGYGSGGGGGSGGGYGGSKGGYGGGSGSGKG

A0A6J1CW11 glycine-rich cell wall structural protein 2-like2.8e-6292.82Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA
        MANPRILSLGFLLLVGLGLASAAR LLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA

Query:  RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSG
        RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGG G GG      GYGS G GGY  G
Subjt:  RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSG

A0A6J1CWP3 glycine-rich cell wall structural protein 1.8-like isoform X14.7e-5480.44Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA
        MA  +  SL FLLL+G GLASAARTLL ++P  ++     YDR     +VGYD +HHD   GAYGGG+GGGYG+G GS+LGGSGYGSGGGGGGGSGYGGA
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGA

Query:  RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGPGEHGAGYGSG
         DHG GYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSG GYGD  GRGKGYGSG GGGSGYGGGGDHGAGYGSGGGGGYGSGGGGG GYGPGEHG GYGSG
Subjt:  RDHGAGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGPGEHGAGYGSG

Query:  GGGGSGGGYGGSKGGYGGGSGSGKG
        GGGGSGGGYGGSKGGYGGGSG GKG
Subjt:  GGGGSGGGYGGSKGGYGGGSGSGKG

A0A6J1E911 glycine-rich cell wall structural protein 1.8-like2.1e-4169.48Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGG--------
        MA  + LSL FLLL+GLGLASAARTLL+YDPPHHS VGY Y     NP+VGYD +HHD PYGAYGGG+GGGYG+G GS+LGGSGYGSGGGGG        
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGG--------

Query:  -GGSGYGGA------------RDHGAGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGY
         GGSGYG                HG GYGSGGGGG G G G  G  G GYGSGGGGGSG GYGD+ G GKGYGSG GGGSGYGGG DHG GYGSGGGGGY
Subjt:  -GGSGYGGA------------RDHGAGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGY

Query:  GSGGGGGPGYGP-GEHGAGYGSGGGGGSGGGYGGSKGGYGGGS-GSGKG
        G+GGG   GYGP G+HG GYGSGGGGGSGGGYGG   GYGGG+ GSG G
Subjt:  GSGGGGGPGYGP-GEHGAGYGSGGGGGSGGGYGGSKGGYGGGS-GSGKG

A0A6J1KTC0 glycine-rich cell wall structural protein 1.8-like6.4e-4374.89Show/hide
Query:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGY--GSGTGSALGGSGYGSGGGGGGGSGYG
        MA  + LSL FLLL+GLGLASAARTLL+YDPPHHS VGY Y     NP+VGYD +HHD PYGAYGGG+GGGY  G+G GSALGGSGYGSGGGGGGGSGY 
Subjt:  MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGY--GSGTGSALGGSGYGSGGGGGGGSGYG

Query:  GARD-HGAGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGP-GEHGA
        G  D  G+GYGSGGGGG G G G  G  G GYGSGGGGGSG GYGD+ G GKGYGSG GGGSGYGGG DHG GYGSGGGGGYG+GGG   GYGP G+HG 
Subjt:  GARD-HGAGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGP-GEHGA

Query:  GYGSGGGGGSGGGYGGSKGGYGGG-SGSGKG
        GYGSGGGGGSGGGYGG   GYGGG  G G G
Subjt:  GYGSGGGGGSGGGYGGSKGGYGGG-SGSGKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACCCTAGAATTTTATCCCTTGGTTTTCTTCTGCTGGTGGGTTTAGGCTTAGCTTCGGCTGCTAGAACCCTTCTCGCATATGATCCTCCACATCACTCAGCTGT
GGGATATGATTACGATCGTCCTGTGCTTAACCCAAAAGTAGGGTACGATCCTGAGCATCATGATCGACCCTATGGTGCATATGGTGGTGGTGCTGGTGGAGGATATGGGA
GCGGAACTGGCTCTGCCTTGGGAGGTTCTGGATATGGGAGCGGTGGCGGCGGAGGAGGTGGCTCTGGATATGGAGGCGCAAGAGATCATGGAGCTGGTTATGGGAGTGGT
GGAGGTGGTGGATATGGAGGAGGGATGGGATCTGGCCTTGGAGGCGCTGGATACGGGAGTGGTGGCGGTGGAGGAAGCGGCAGAGGATATGGAGATGTAGATGGGCGTGG
AAAAGGATACGGTAGCGGTAGTGGCGGAGGAAGTGGATATGGGGGCGGAGGAGACCATGGGGCTGGTTATGGTAGCGGCGGAGGTGGAGGATATGGAAGTGGAGGCGGTG
GTGGTCCCGGATATGGTCCGGGAGAGCATGGTGCTGGTTATGGAAGTGGAGGAGGAGGAGGGTCTGGTGGTGGTTATGGTGGTTCCAAAGGCGGCTACGGAGGTGGTAGT
GGCAGCGGGAAAGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACCCTAGAATTTTATCCCTTGGTTTTCTTCTGCTGGTGGGTTTAGGCTTAGCTTCGGCTGCTAGAACCCTTCTCGCATATGATCCTCCACATCACTCAGCTGT
GGGATATGATTACGATCGTCCTGTGCTTAACCCAAAAGTAGGGTACGATCCTGAGCATCATGATCGACCCTATGGTGCATATGGTGGTGGTGCTGGTGGAGGATATGGGA
GCGGAACTGGCTCTGCCTTGGGAGGTTCTGGATATGGGAGCGGTGGCGGCGGAGGAGGTGGCTCTGGATATGGAGGCGCAAGAGATCATGGAGCTGGTTATGGGAGTGGT
GGAGGTGGTGGATATGGAGGAGGGATGGGATCTGGCCTTGGAGGCGCTGGATACGGGAGTGGTGGCGGTGGAGGAAGCGGCAGAGGATATGGAGATGTAGATGGGCGTGG
AAAAGGATACGGTAGCGGTAGTGGCGGAGGAAGTGGATATGGGGGCGGAGGAGACCATGGGGCTGGTTATGGTAGCGGCGGAGGTGGAGGATATGGAAGTGGAGGCGGTG
GTGGTCCCGGATATGGTCCGGGAGAGCATGGTGCTGGTTATGGAAGTGGAGGAGGAGGAGGGTCTGGTGGTGGTTATGGTGGTTCCAAAGGCGGCTACGGAGGTGGTAGT
GGCAGCGGGAAAGGT
Protein sequenceShow/hide protein sequence
MANPRILSLGFLLLVGLGLASAARTLLAYDPPHHSAVGYDYDRPVLNPKVGYDPEHHDRPYGAYGGGAGGGYGSGTGSALGGSGYGSGGGGGGGSGYGGARDHGAGYGSG
GGGGYGGGMGSGLGGAGYGSGGGGGSGRGYGDVDGRGKGYGSGSGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGPGYGPGEHGAGYGSGGGGGSGGGYGGSKGGYGGGS
GSGKG