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MS014657 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014657
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
Genome locationscaffold1315:20068..20499
RNA-Seq ExpressionMS014657
SyntenyMS014657
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053038.1 glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis melo var. makuwa]2.6e-1553.99Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGG----------YGG-EVERDVG
        MA  R + L  L+LVGLGLASAARTLLDYD   R YGY RP+PRVGYDP H DESYDN+YG  GS S+  G GD   GG          YGG   +  VG
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGG----------YGG-EVERDVG

Query:  YGR--GYGS--GGSEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY
        YG   GYGS  G  +GYG  G  G G GYG++G G GS  G   GYGN+G G G   G+  GY
Subjt:  YGR--GYGS--GGSEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY

KAG6577708.1 hypothetical protein SDJN03_25282, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1549.72Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRG-----------SGSRYGGRGDHGSG-------GYGG
        MA  RV+ L  L+LVGLGLASAARTLLDYD   R YGY RP+PR GYD  H DESYDN+YGGR             GS YG  G  GSG        YGG
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRG-----------SGSRYGGRGDHGSG-------GYGG

Query:  EVERDVG---------------YGRGYGSGGSEGYGPGGDRGGYGYGSSGS-GIGSNNGGEGGYGNSGKGSGDESGYDGGY
         V   VG               +G GYG G S GY  GG+ GGYG G     G GS NG   GYG+S  G G+  G+DGGY
Subjt:  EVERDVG---------------YGRGYGSGGSEGYGPGGDRGGYGYGSSGS-GIGSNNGGEGGYGNSGKGSGDESGYDGGY

XP_008448676.1 PREDICTED: glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis melo]2.6e-1553.99Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGG----------YGG-EVERDVG
        MA  R + L  L+LVGLGLASAARTLLDYD   R YGY RP+PRVGYDP H DESYDN+YG  GS S+  G GD   GG          YGG   +  VG
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGG----------YGG-EVERDVG

Query:  YGR--GYGS--GGSEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY
        YG   GYGS  G  +GYG  G  G G GYG++G G GS  G   GYGN+G G G   G+  GY
Subjt:  YGR--GYGS--GGSEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY

XP_008449165.1 PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo]2.6e-1555.77Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDH--GSGGYGGEVERDVGYGR------
        MA LR + L  L+ VGLGLASA RTLLDYD   R YGY RPSPRVGYDP H DESYDN YG  GS SR  G GD   G  GY G   RD GYG       
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDH--GSGGYGGEVERDVGYGR------

Query:  -GYGSGGSEGYGPGGDRGGYGYGSSGSGIGSNNG---GEGGYGNSGKGSGDESGYD
         GYG+GG  G G GG   GYG  + G G G   G   G  GYG+ GKGS  ++GYD
Subjt:  -GYGSGGSEGYGPGGDRGGYGYGSSGSGIGSNNG---GEGGYGNSGKGSGDESGYD

XP_038903414.1 glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]5.7e-1550.58Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGGYGGEVE----RDVGY------
        MA  RVV LG L+L+G GLAS ARTLLDYD   R+Y Y RP+PRVGYDP H DESYDN YG  GS +R  G GD   GGY G  E    RD GY      
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGGYGGEVE----RDVGY------

Query:  -GRGYGSGG--------SEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGK-----GSGDESGYDGGY
         G GYG+GG         +GYG  G RG  YGYG      G   G  GGYG+ G+     GS    GY  GY
Subjt:  -GRGYGSGG--------SEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGK-----GSGDESGYDGGY

TrEMBL top hitse value%identityAlignment
A0A1S3BL53 glycine-rich cell wall structural protein 2-like isoform X11.2e-1553.99Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGG----------YGG-EVERDVG
        MA  R + L  L+LVGLGLASAARTLLDYD   R YGY RP+PRVGYDP H DESYDN+YG  GS S+  G GD   GG          YGG   +  VG
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGG----------YGG-EVERDVG

Query:  YGR--GYGS--GGSEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY
        YG   GYGS  G  +GYG  G  G G GYG++G G GS  G   GYGN+G G G   G+  GY
Subjt:  YGR--GYGS--GGSEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY

A0A1S3BMC4 glycine-rich cell wall structural protein 1.8-like1.2e-1555.77Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDH--GSGGYGGEVERDVGYGR------
        MA LR + L  L+ VGLGLASA RTLLDYD   R YGY RPSPRVGYDP H DESYDN YG  GS SR  G GD   G  GY G   RD GYG       
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDH--GSGGYGGEVERDVGYGR------

Query:  -GYGSGGSEGYGPGGDRGGYGYGSSGSGIGSNNG---GEGGYGNSGKGSGDESGYD
         GYG+GG  G G GG   GYG  + G G G   G   G  GYG+ GKGS  ++GYD
Subjt:  -GYGSGGSEGYGPGGDRGGYGYGSSGSGIGSNNG---GEGGYGNSGKGSGDESGYD

A0A5A7UCW7 Glycine-rich cell wall structural protein 2-like isoform X11.2e-1553.99Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGG----------YGG-EVERDVG
        MA  R + L  L+LVGLGLASAARTLLDYD   R YGY RP+PRVGYDP H DESYDN+YG  GS S+  G GD   GG          YGG   +  VG
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGG----------YGG-EVERDVG

Query:  YGR--GYGS--GGSEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY
        YG   GYGS  G  +GYG  G  G G GYG++G G GS  G   GYGN+G G G   G+  GY
Subjt:  YGR--GYGS--GGSEGYGPGGDRG-GYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY

A0A5A7UHU2 Glycine-rich cell wall structural protein 1.8-like1.2e-1555.77Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDH--GSGGYGGEVERDVGYGR------
        MA LR + L  L+ VGLGLASA RTLLDYD   R YGY RPSPRVGYDP H DESYDN YG  GS SR  G GD   G  GY G   RD GYG       
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDH--GSGGYGGEVERDVGYGR------

Query:  -GYGSGGSEGYGPGGDRGGYGYGSSGSGIGSNNG---GEGGYGNSGKGSGDESGYD
         GYG+GG  G G GG   GYG  + G G G   G   G  GYG+ GKGS  ++GYD
Subjt:  -GYGSGGSEGYGPGGDRGGYGYGSSGSGIGSNNG---GEGGYGNSGKGSGDESGYD

A0A6J1E6E4 glycine-rich protein DOT1-like isoform X21.1e-1443.19Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGR-------------------------------------
        MA  RV+ L  L+LVGLGLASAARTLLDYD   R YGY RP+PR GYD  H DESYDN YGGR                                     
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYD---RRYGYGRPSPRVGYDPDHGDESYDNIYGGR-------------------------------------

Query:  -----------GSGSRYGGRGDH---------------GSGGYGGEVERDVGYGRGYGSGGSEGYGPGGDRGGYGYGS---SGSGIGSNNGGEGGYGNSG
                   GSGSRYGG  DH               G+GGYG   + D+GYG  Y +GG+ GYG G D    GYGS   +G+G G+ NG   GYG+S 
Subjt:  -----------GSGSRYGGRGDH---------------GSGGYGGEVERDVGYGRGYGSGGSEGYGPGGDRGGYGYGS---SGSGIGSNNGGEGGYGNSG

Query:  KGSGDESGYDGGY
         G G+  G DGGY
Subjt:  KGSGDESGYDGGY

SwissProt top hitse value%identityAlignment
A3C5A7 Glycine-rich cell wall structural protein 23.6e-0447.26Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYDRRYGYGRPSPRVGYDPDHGDESYDNIYGGR--GSGSRYGGRGDHGSGGYGGEVERDVGYGRGYGSGGSEG
        MAT + ++L ILVL+ +G+ ++ARTLL      GYG   P  G     G E     YGG   GSGS YG  G  GSGG  G      GYGRG G GG  G
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYDRRYGYGRPSPRVGYDPDHGDESYDNIYGGR--GSGSRYGGRGDHGSGGYGGEVERDVGYGRGYGSGGSEG

Query:  YGPGGDRGGYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY
         G GG   GYG G  GSG G+  GG GGYG+ G G G + G  GGY
Subjt:  YGPGGDRGGYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY

P0C5C7 Glycine-rich cell wall structural protein 23.6e-0447.26Show/hide
Query:  MATLRVVSLGILVLVGLGLASAARTLLDYDRRYGYGRPSPRVGYDPDHGDESYDNIYGGR--GSGSRYGGRGDHGSGGYGGEVERDVGYGRGYGSGGSEG
        MAT + ++L ILVL+ +G+ ++ARTLL      GYG   P  G     G E     YGG   GSGS YG  G  GSGG  G      GYGRG G GG  G
Subjt:  MATLRVVSLGILVLVGLGLASAARTLLDYDRRYGYGRPSPRVGYDPDHGDESYDNIYGGR--GSGSRYGGRGDHGSGGYGGEVERDVGYGRGYGSGGSEG

Query:  YGPGGDRGGYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY
         G GG   GYG G  GSG G+  GG GGYG+ G G G + G  GGY
Subjt:  YGPGGDRGGYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCCTAAGAGTTGTGTCACTTGGAATTCTTGTGCTGGTGGGTTTGGGCTTAGCTTCGGCTGCCCGAACCCTCCTGGATTATGATCGTCGCTACGGTTATGGTCG
TCCCAGCCCACGAGTAGGGTATGATCCCGACCATGGTGATGAATCGTATGATAACATATATGGCGGTCGAGGAAGTGGTTCCAGATATGGGGGTCGAGGAGATCATGGCA
GCGGTGGATATGGAGGTGAAGTGGAGCGTGATGTTGGTTATGGTAGAGGATATGGAAGTGGAGGCAGTGAAGGATATGGTCCAGGAGGAGATCGTGGTGGCTATGGCTAT
GGTAGCAGTGGCAGTGGAATTGGGTCTAATAATGGTGGAGAAGGAGGATATGGTAATAGTGGCAAAGGAAGTGGAGATGAGAGTGGATATGATGGGGGATAT
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCCTAAGAGTTGTGTCACTTGGAATTCTTGTGCTGGTGGGTTTGGGCTTAGCTTCGGCTGCCCGAACCCTCCTGGATTATGATCGTCGCTACGGTTATGGTCG
TCCCAGCCCACGAGTAGGGTATGATCCCGACCATGGTGATGAATCGTATGATAACATATATGGCGGTCGAGGAAGTGGTTCCAGATATGGGGGTCGAGGAGATCATGGCA
GCGGTGGATATGGAGGTGAAGTGGAGCGTGATGTTGGTTATGGTAGAGGATATGGAAGTGGAGGCAGTGAAGGATATGGTCCAGGAGGAGATCGTGGTGGCTATGGCTAT
GGTAGCAGTGGCAGTGGAATTGGGTCTAATAATGGTGGAGAAGGAGGATATGGTAATAGTGGCAAAGGAAGTGGAGATGAGAGTGGATATGATGGGGGATAT
Protein sequenceShow/hide protein sequence
MATLRVVSLGILVLVGLGLASAARTLLDYDRRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGGYGGEVERDVGYGRGYGSGGSEGYGPGGDRGGYGY
GSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY