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MS014662 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014662
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1315:64191..64520
RNA-Seq ExpressionMS014662
SyntenyMS014662
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577703.1 hypothetical protein SDJN03_25277, partial [Cucurbita argyrosperma subsp. sororia]9.1e-2157.66Show/hide
Query:  MSLNCLSCQLLQRSDSERE-----QRCYSDGLSSSERSWSGNLSLRPPCEDRP------GVPLPTAAAKGHRRLHTTGAVSFG-KEPRLVRSSGMRRDWS
        M+LNCLSCQLLQR+DSER+     Q  YS  +  S RSWSGNLS RPP  DRP       +P   A     RRLH++G +S G KEP+LVRSSGMRRDWS
Subjt:  MSLNCLSCQLLQRSDSERE-----QRCYSDGLSSSERSWSGNLSLRPPCEDRP------GVPLPTAAAKGHRRLHTTGAVSFG-KEPRLVRSSGMRRDWS

Query:  FEDLRSIAQQR
        FEDLR+I +++
Subjt:  FEDLRSIAQQR
XP_022952265.1 uncharacterized protein LOC111454968 [Cucurbita moschata]3.1e-2158.18Show/hide
Query:  MSLNCLSCQL-LQRSDSER---EQRCYSDGLSSSERSWSGNLSLRPPC-EDRPGVPLPT---AAAKGHRRLHTTGAVSF---GKEPRLVRSSGMRRDWSF
        MSLNCLSCQL LQRSDS++   +   ++D   S +RSWSGNLS RPP  ++  G  + T    A  GHRRLH+TGAV+F   GKEPRL+RS+GMRRDWSF
Subjt:  MSLNCLSCQL-LQRSDSER---EQRCYSDGLSSSERSWSGNLSLRPPC-EDRPGVPLPT---AAAKGHRRLHTTGAVSF---GKEPRLVRSSGMRRDWSF

Query:  EDLRSIAQQR
        EDLR+I + +
Subjt:  EDLRSIAQQR
XP_023007608.1 uncharacterized protein LOC111500186 [Cucurbita maxima]5.3e-2157.66Show/hide
Query:  MSLNCLSCQLLQRSDSERE-----QRCYSDGLSSSERSWSGNLSLRPPCEDRP------GVPLPTAAAKGHRRLHTTGAVSFG-KEPRLVRSSGMRRDWS
        M+LNCLSCQLLQR+DSER+     Q  YS  +  S RSWSGNLS RPP  DRP       +P   A     RRLH++G +S G KEP+LVRSSGMRRDWS
Subjt:  MSLNCLSCQLLQRSDSERE-----QRCYSDGLSSSERSWSGNLSLRPPCEDRP------GVPLPTAAAKGHRRLHTTGAVSFG-KEPRLVRSSGMRRDWS

Query:  FEDLRSIAQQR
        FEDLR+I +++
Subjt:  FEDLRSIAQQR
XP_023539506.1 uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo]1.8e-2158.18Show/hide
Query:  MSLNCLSCQL-LQRSDSER---EQRCYSDGLSSSERSWSGNLSLRPPC-EDRPGVPLPT---AAAKGHRRLHTTGAVSF---GKEPRLVRSSGMRRDWSF
        MSLNCLSCQL LQRSDS++   +   ++D   S +RSWSGNLS RPP  ++  G  + T    A  GHRRLH+TGAV+F   GKEPRL+RS+GMRRDWSF
Subjt:  MSLNCLSCQL-LQRSDSER---EQRCYSDGLSSSERSWSGNLSLRPPC-EDRPGVPLPT---AAAKGHRRLHTTGAVSF---GKEPRLVRSSGMRRDWSF

Query:  EDLRSIAQQR
        EDLR+I +++
Subjt:  EDLRSIAQQR
XP_023553065.1 uncharacterized protein LOC111810575 [Cucurbita pepo subsp. pepo]9.1e-2157.66Show/hide
Query:  MSLNCLSCQLLQRSDSERE-----QRCYSDGLSSSERSWSGNLSLRPPCEDRP------GVPLPTAAAKGHRRLHTTGAVSFG-KEPRLVRSSGMRRDWS
        M+LNCLSCQLLQR+DSER+     Q  YS  +  S RSWSGNLS RPP  DRP       +P   A     RRLH++G +S G KEP+LVRSSGMRRDWS
Subjt:  MSLNCLSCQLLQRSDSERE-----QRCYSDGLSSSERSWSGNLSLRPPCEDRP------GVPLPTAAAKGHRRLHTTGAVSFG-KEPRLVRSSGMRRDWS

Query:  FEDLRSIAQQR
        FEDLR+I +++
Subjt:  FEDLRSIAQQR
TrEMBL top hitse value%identityAlignment
A0A0A0L198 Uncharacterized protein2.7e-1856Show/hide
Query:  MSLNCLSCQLLQRSDSERE-----QRCY-SDGLSSSERSWSGNLSLRP--------PCEDRPGVPLPTAAAKGHRRLHTTGAVSF-GKEPRLVRSSGMRR
        MSLNCLSCQ+LQR+DSER      Q  Y SD  +SSERSWSGNL LRP              G+     A  GHRR     AVSF GKEPRL+RSSGMRR
Subjt:  MSLNCLSCQLLQRSDSERE-----QRCY-SDGLSSSERSWSGNLSLRP--------PCEDRPGVPLPTAAAKGHRRLHTTGAVSF-GKEPRLVRSSGMRR

Query:  DWSFEDLRSIAQQRTQNQPQPSANS
        DWSFEDLR+I +++     QPS NS
Subjt:  DWSFEDLRSIAQQRTQNQPQPSANS
A0A1S3BJN6 uncharacterized protein LOC1034907831.0e-1758.68Show/hide
Query:  MSLNCLSCQLLQRSDSERE-----QRCY-SDGLSSSERSWSGNLSLRPPCEDRPGVPLPTA----AAKGHRRLHTTGAVSF-GKEPRLVRSSGMRRDWSF
        MSLNCLSCQLLQR+DSER      Q  Y SD    S+RSWSGNLSLR   ++R GV    A    A   HRR     AVSF GKEPRLVRSSGMRRDWSF
Subjt:  MSLNCLSCQLLQRSDSERE-----QRCY-SDGLSSSERSWSGNLSLRPPCEDRPGVPLPTA----AAKGHRRLHTTGAVSF-GKEPRLVRSSGMRRDWSF

Query:  EDLRSIAQQRTQNQPQPSANS
        EDLR+I +++     +PS NS
Subjt:  EDLRSIAQQRTQNQPQPSANS
A0A5A7UAS3 Uncharacterized protein1.0e-1758.68Show/hide
Query:  MSLNCLSCQLLQRSDSERE-----QRCY-SDGLSSSERSWSGNLSLRPPCEDRPGVPLPTA----AAKGHRRLHTTGAVSF-GKEPRLVRSSGMRRDWSF
        MSLNCLSCQLLQR+DSER      Q  Y SD    S+RSWSGNLSLR   ++R GV    A    A   HRR     AVSF GKEPRLVRSSGMRRDWSF
Subjt:  MSLNCLSCQLLQRSDSERE-----QRCY-SDGLSSSERSWSGNLSLRPPCEDRPGVPLPTA----AAKGHRRLHTTGAVSF-GKEPRLVRSSGMRRDWSF

Query:  EDLRSIAQQRTQNQPQPSANS
        EDLR+I +++     +PS NS
Subjt:  EDLRSIAQQRTQNQPQPSANS
A0A6J1GL99 uncharacterized protein LOC1114549681.5e-2158.18Show/hide
Query:  MSLNCLSCQL-LQRSDSER---EQRCYSDGLSSSERSWSGNLSLRPPC-EDRPGVPLPT---AAAKGHRRLHTTGAVSF---GKEPRLVRSSGMRRDWSF
        MSLNCLSCQL LQRSDS++   +   ++D   S +RSWSGNLS RPP  ++  G  + T    A  GHRRLH+TGAV+F   GKEPRL+RS+GMRRDWSF
Subjt:  MSLNCLSCQL-LQRSDSER---EQRCYSDGLSSSERSWSGNLSLRPPC-EDRPGVPLPT---AAAKGHRRLHTTGAVSF---GKEPRLVRSSGMRRDWSF

Query:  EDLRSIAQQR
        EDLR+I + +
Subjt:  EDLRSIAQQR
A0A6J1L834 uncharacterized protein LOC1115001862.6e-2157.66Show/hide
Query:  MSLNCLSCQLLQRSDSERE-----QRCYSDGLSSSERSWSGNLSLRPPCEDRP------GVPLPTAAAKGHRRLHTTGAVSFG-KEPRLVRSSGMRRDWS
        M+LNCLSCQLLQR+DSER+     Q  YS  +  S RSWSGNLS RPP  DRP       +P   A     RRLH++G +S G KEP+LVRSSGMRRDWS
Subjt:  MSLNCLSCQLLQRSDSERE-----QRCYSDGLSSSERSWSGNLSLRPPCEDRP------GVPLPTAAAKGHRRLHTTGAVSFG-KEPRLVRSSGMRRDWS

Query:  FEDLRSIAQQR
        FEDLR+I +++
Subjt:  FEDLRSIAQQR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein1.0e-1443Show/hide
Query:  MSLNCLSCQLLQRSDSEREQRCYSDGLSSSERSWSGNLSLRPPCEDRPGVPLPTAAAKGHRRLHTTGAVSFGK--EPRLVRSSGMRRDWSFEDLRSIAQQ
        MSLNCL+C +LQR+DS+R+     D   SS +      +      +R  +P+     KGHRRL++   + +G+  EP+LVRSSG+RRDWSFEDL+    Q
Subjt:  MSLNCLSCQLLQRSDSEREQRCYSDGLSSSERSWSGNLSLRPPCEDRPGVPLPTAAAKGHRRLHTTGAVSFGK--EPRLVRSSGMRRDWSFEDLRSIAQQ
AT5G46770.1 unknown protein2.5e-0837.5Show/hide
Query:  MSLNCLSCQLLQRSDSEREQRCYSDGLSSSE----------------RSWSGNLSLRPPCE-DRPGVPLPTAAAKGHRRLHT--TGAVSFG--------K
        MSLNCLSCQ L R+DS ++      G    E                R+WSGNLS R   +  RPG  L     K  +  H   +G V           +
Subjt:  MSLNCLSCQLLQRSDSEREQRCYSDGLSSSE----------------RSWSGNLSLRPPCE-DRPGVPLPTAAAKGHRRLHT--TGAVSFG--------K

Query:  EPRLVRSSGMRRDWSFEDLR
        +P+LVRS+G+RR+WSFE+LR
Subjt:  EPRLVRSSGMRRDWSFEDLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTGAACTGCCTCTCGTGCCAGCTGCTGCAGAGATCGGACTCGGAGAGAGAACAGAGATGTTACTCCGACGGCTTATCCTCGTCGGAGCGCAGCTGGTCCGGCAA
CCTCTCCCTCAGGCCGCCCTGCGAGGACCGCCCCGGTGTTCCGCTTCCGACGGCGGCCGCCAAGGGACACCGCCGCCTCCACACCACCGGCGCCGTCTCCTTCGGCAAGG
AGCCCAGGCTCGTCAGAAGCTCCGGCATGAGGAGGGATTGGAGCTTCGAGGATCTTAGATCCATCGCTCAACAGCGAACCCAAAACCAACCCCAACCCTCCGCCAATTCC
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTGAACTGCCTCTCGTGCCAGCTGCTGCAGAGATCGGACTCGGAGAGAGAACAGAGATGTTACTCCGACGGCTTATCCTCGTCGGAGCGCAGCTGGTCCGGCAA
CCTCTCCCTCAGGCCGCCCTGCGAGGACCGCCCCGGTGTTCCGCTTCCGACGGCGGCCGCCAAGGGACACCGCCGCCTCCACACCACCGGCGCCGTCTCCTTCGGCAAGG
AGCCCAGGCTCGTCAGAAGCTCCGGCATGAGGAGGGATTGGAGCTTCGAGGATCTTAGATCCATCGCTCAACAGCGAACCCAAAACCAACCCCAACCCTCCGCCAATTCC
Protein sequenceShow/hide protein sequence
MSLNCLSCQLLQRSDSEREQRCYSDGLSSSERSWSGNLSLRPPCEDRPGVPLPTAAAKGHRRLHTTGAVSFGKEPRLVRSSGMRRDWSFEDLRSIAQQRTQNQPQPSANS