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MS014679 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014679
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlate embryogenesis abundant protein 18
Genome locationscaffold1315:208028..208309
RNA-Seq ExpressionMS014679
SyntenyMS014679
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148757.1 late embryogenesis abundant protein 6 [Cucumis sativus]6.8e-1768.82Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHA--PLPVEGGAATHLAGA-NVPAYPLPS-QGYRPAGHK
        +V+K++ KTAEE++I++ERRKA  AEAKRELHEAKARHAAQKL +RK SHV GGH     P+EGGAATHL GA NVPAYP+ S +GY P GHK
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHA--PLPVEGGAATHLAGA-NVPAYPLPS-QGYRPAGHK

XP_008448704.1 PREDICTED: uncharacterized protein LOC103490795 [Cucumis melo]2.6e-1669.15Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGG---HAPLPVEGGAATHLAG-ANVPAYPLPS-QGYRPAGHK
        +V+K++ KTAEE++IV+ERRKA  AEAKRELHEAKARHAAQKL +RK SHV GG   H   PVEGGAATHL G  NVPAYP+ S +GY P GHK
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGG---HAPLPVEGGAATHLAG-ANVPAYPLPS-QGYRPAGHK

XP_022145338.1 late embryogenesis abundant protein 18 [Momordica charantia]1.2e-3798.89Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVPAYPLPSQGYRPAGHKF
        +VKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVPAYPLPSQGYRPAGHKF
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVPAYPLPSQGYRPAGHKF

XP_022923387.1 late embryogenesis abundant protein 6-like isoform X2 [Cucurbita moschata]1.7e-1264.13Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHV--HGGHAPLPVEGGAATHLAGANVPAYPLPS-QGYRPAGHK
        +V+K++AKTAEE++I +ERRKA EAEAKRELHEAKARHAAQKL +R+ SHV  H  H   PVEGG+A     ANVPAYP+ S +GY P GH+
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHV--HGGHAPLPVEGGAATHLAGANVPAYPLPS-QGYRPAGHK

XP_038906206.1 late embryogenesis abundant protein 6-like [Benincasa hispida]7.0e-1464.52Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHA--PLPVEGGAATHLAGANVP-AYPLP-SQGYRPAGHK
        +V+K++ KT EE++I +ERRKA  AEAKRELHEAKARHAAQKL S+K SHV GGH     P+EG AAT+L  ANVP AYP+P ++GY P GHK
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHA--PLPVEGGAATHLAGANVP-AYPLP-SQGYRPAGHK

TrEMBL top hitse value%identityAlignment
A0A0A0L1A9 Uncharacterized protein1.1e-1767.01Show/hide
Query:  LKCMQVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHA--PLPVEGGAATHLAGA-NVPAYPLPS-QGYRPAGHK
        ++  QV+K++ KTAEE++I++ERRKA  AEAKRELHEAKARHAAQKL +RK SHV GGH     P+EGGAATHL GA NVPAYP+ S +GY P GHK
Subjt:  LKCMQVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHA--PLPVEGGAATHLAGA-NVPAYPLPS-QGYRPAGHK

A0A1S3BKB4 uncharacterized protein LOC1034907951.2e-1669.15Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGG---HAPLPVEGGAATHLAG-ANVPAYPLPS-QGYRPAGHK
        +V+K++ KTAEE++IV+ERRKA  AEAKRELHEAKARHAAQKL +RK SHV GG   H   PVEGGAATHL G  NVPAYP+ S +GY P GHK
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGG---HAPLPVEGGAATHLAG-ANVPAYPLPS-QGYRPAGHK

A0A5D3CHS9 Seed maturation protein1.2e-1669.15Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGG---HAPLPVEGGAATHLAG-ANVPAYPLPS-QGYRPAGHK
        +V+K++ KTAEE++IV+ERRKA  AEAKRELHEAKARHAAQKL +RK SHV GG   H   PVEGGAATHL G  NVPAYP+ S +GY P GHK
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGG---HAPLPVEGGAATHLAG-ANVPAYPLPS-QGYRPAGHK

A0A6J1CVP3 late embryogenesis abundant protein 185.8e-3898.89Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVPAYPLPSQGYRPAGHKF
        +VKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVPAYPLPSQGYRPAGHKF
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVPAYPLPSQGYRPAGHKF

A0A6J1E5Y8 late embryogenesis abundant protein 6-like isoform X28.4e-1364.13Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHV--HGGHAPLPVEGGAATHLAGANVPAYPLPS-QGYRPAGHK
        +V+K++AKTAEE++I +ERRKA EAEAKRELHEAKARHAAQKL +R+ SHV  H  H   PVEGG+A     ANVPAYP+ S +GY P GH+
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHV--HGGHAPLPVEGGAATHLAGANVPAYPLPS-QGYRPAGHK

SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 66.9e-0440.86Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRK-HSHV--HGGH----APLPVEGGAATHLAGAN-VPAYPLPSQGYRP
        + +++ A+T EEK I  +RRKA+EAEA  ++H AKA HA  KL +++ H HV  HG H    AP+P       H  G N      +P Q Y P
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRK-HSHV--HGGH----APLPVEGGAATHLAGAN-VPAYPLPSQGYRP

Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein4.9e-0540.86Show/hide
Query:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRK-HSHV--HGGH----APLPVEGGAATHLAGAN-VPAYPLPSQGYRP
        + +++ A+T EEK I  +RRKA+EAEA  ++H AKA HA  KL +++ H HV  HG H    AP+P       H  G N      +P Q Y P
Subjt:  QVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRK-HSHV--HGGH----APLPVEGGAATHLAGAN-VPAYPLPSQGYRP

AT2G35300.1 Late embryogenesis abundant protein, group 1 protein4.1e-0441.67Show/hide
Query:  KKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVP
        +K+ A+T +EK++ +ER K++EA+AK +LH++KA HAA        + VHG H  LP      T   GAN P
Subjt:  KKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGAAATGTATGCAGGTCAAGAAATCCACGGCGAAAACGGCGGAGGAGAAGAGGATTGTGAAGGAGAGGAGGAAGGCGAGGGAGGCGGAGGCGAAGCGGGAGCTGCACGA
GGCGAAAGCCAGGCATGCAGCTCAAAAGCTAAGCAGTAGGAAGCATTCCCACGTACATGGTGGCCATGCACCACTGCCGGTGGAGGGCGGCGCCGCCACTCATCTCGCCG
GAGCAAATGTTCCTGCTTATCCTTTACCCAGCCAGGGCTACCGTCCGGCGGGGCACAAATTT
mRNA sequenceShow/hide mRNA sequence
CTGAAATGTATGCAGGTCAAGAAATCCACGGCGAAAACGGCGGAGGAGAAGAGGATTGTGAAGGAGAGGAGGAAGGCGAGGGAGGCGGAGGCGAAGCGGGAGCTGCACGA
GGCGAAAGCCAGGCATGCAGCTCAAAAGCTAAGCAGTAGGAAGCATTCCCACGTACATGGTGGCCATGCACCACTGCCGGTGGAGGGCGGCGCCGCCACTCATCTCGCCG
GAGCAAATGTTCCTGCTTATCCTTTACCCAGCCAGGGCTACCGTCCGGCGGGGCACAAATTT
Protein sequenceShow/hide protein sequence
LKCMQVKKSTAKTAEEKRIVKERRKAREAEAKRELHEAKARHAAQKLSSRKHSHVHGGHAPLPVEGGAATHLAGANVPAYPLPSQGYRPAGHKF