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MS014688 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014688
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionENDO3c domain-containing protein
Genome locationscaffold659:55004..55229
RNA-Seq ExpressionMS014688
SyntenyMS014688
Gene Ontology termsGO:0006285 - base-excision repair, AP site formation (biological process)
GO:0006307 - DNA dealkylation involved in DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0032993 - protein-DNA complex (cellular component)
GO:0008725 - DNA-3-methyladenine glycosylase activity (molecular function)
GO:0032131 - alkylated DNA binding (molecular function)
GO:0043916 - DNA-7-methylguanine glycosylase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603971.1 Zinc-finger homeodomain protein 6, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0851.35Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        L  LT VKGI +W V++F+IF LH+P++L  VGDL V KG++ LY     + +   +EMEKLCEKW+ Y  MGA
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
XP_004143510.1 DNA-3-methyladenine glycosylase 1 [Cucumis sativus]2.0e-0851.35Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        LR LT VKGI +W V++F+IF LH+P++L  VGDL V KG++ LY     + +    EMEKLCEKW+ Y  +GA
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
XP_022132520.1 DNA-3-methyladenine glycosylase 1-like [Momordica charantia]9.1e-0951.35Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        +RTLT VKGI +W V +F+IF+LH+P++L  VGDL V KG++ LY     + +   +EMEKLC+KW+ Y  MGA
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
XP_022949777.1 DNA-3-methyladenine glycosylase 1-like [Cucurbita moschata]2.0e-0851.35Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        L  LT VKGI +W V++F+IF LH+P++L  VGDL V KG++ LY     + +   +EMEKLCEKW+ Y  MGA
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
XP_031389357.1 probable DNA-3-methyladenine glycosylase 2 [Punica granatum]9.1e-0948.65Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        LR LTTVKGI +W V++F++F+LH+P++L  VGDL V KG++LLY     + +   +EME++CEKW+ Y  +G+
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
TrEMBL top hitse value%identityAlignment
A0A0A0KM62 ENDO3c domain-containing protein9.9e-0951.35Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        LR LT VKGI +W V++F+IF LH+P++L  VGDL V KG++ LY     + +    EMEKLCEKW+ Y  +GA
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
A0A218W242 probable DNA-3-methyladenine glycosylase 24.4e-0948.65Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        LR LTTVKGI +W V++F++F+LH+P++L  VGDL V KG++LLY     + +   +EME++CEKW+ Y  +G+
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
A0A6J1BSP4 DNA-3-methyladenine glycosylase 1-like4.4e-0951.35Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        +RTLT VKGI +W V +F+IF+LH+P++L  VGDL V KG++ LY     + +   +EMEKLC+KW+ Y  MGA
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
A0A6J1GD23 DNA-3-methyladenine glycosylase 1-like9.9e-0951.35Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        L  LT VKGI +W V++F+IF LH+P++L  VGDL V KG++ LY     + +   +EMEKLCEKW+ Y  MGA
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
A0A6J1IQD1 DNA-3-methyladenine glycosylase 1-like1.7e-0851.35Show/hide
Query:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        L  LT VKGI +W V++F+IF LH+P++L  VGDL V KG++ LY     + +   +EMEKLCEKW+ Y  MGA
Subjt:  LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G50880.1 DNA glycosylase superfamily protein2.3e-1046.48Show/hide
Query:  LTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA
        LT VKGI +W V++F+IF+LH+P++L  VGDL V KG++ LY     + +   ++ME+LCEKW  Y  +G+
Subjt:  LTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTACGGACGTTGACGACGGTGAAGGGAATCGATCTTTGGTTGGTGTATATATTCTTGATTTTTAACCTGCACCAGCCGAACATGTTATGGCTGGTGGGAGATCTCGACGT
CGGAAAAGGCATGCGGCTGCTGTACGAGAAATGGGATGGAGAAACTGTGAAGATGGAGATGGAGATGGAAAAACTATGCGAGAAATGGGAGTCGTACACATGGATGGGGG
CT
mRNA sequenceShow/hide mRNA sequence
CTACGGACGTTGACGACGGTGAAGGGAATCGATCTTTGGTTGGTGTATATATTCTTGATTTTTAACCTGCACCAGCCGAACATGTTATGGCTGGTGGGAGATCTCGACGT
CGGAAAAGGCATGCGGCTGCTGTACGAGAAATGGGATGGAGAAACTGTGAAGATGGAGATGGAGATGGAAAAACTATGCGAGAAATGGGAGTCGTACACATGGATGGGGG
CT
Protein sequenceShow/hide protein sequence
LRTLTTVKGIDLWLVYIFLIFNLHQPNMLWLVGDLDVGKGMRLLYEKWDGETVKMEMEMEKLCEKWESYTWMGA