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MS014693 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014693
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold659:148961..149137
RNA-Seq ExpressionMS014693
SyntenyMS014693
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059476.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]4.4e-0645.1Show/hide
Query:  EDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE
        +D W    P +S++ + Y++S+KK ALVA  W   NQ WD+G+RRR  D+E
Subjt:  EDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE

KAE8682317.1 Polynucleotide adenylyltransferase family protein isoform 4 [Hibiscus syriacus]1.4e-0440.98Show/hide
Query:  NGHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGE--NQTWDMGIRRRFLDKE
        NGH++ FW DAW  E P   +FP  Y LS  KE  V E  +       WD+  RR  +D E
Subjt:  NGHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGE--NQTWDMGIRRRFLDKE

TYK01352.1 hypothetical protein E5676_scaffold29G00370 [Cucumis melo var. makuwa]2.9e-0542.86Show/hide
Query:  HIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE
        +I FW+D+     P S  FP+ + LS  K+A VAECW   + +W++G+RR  LD E
Subjt:  HIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE

XP_022149391.1 uncharacterized protein LOC111017819 [Momordica charantia]7.3e-0948.28Show/hide
Query:  GHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE
        G  I FW D W  EA  +  FP+ Y +S KKEA+VA+CW    +TWD+G RR   D+E
Subjt:  GHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]1.2e-0642.86Show/hide
Query:  GHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLD
        G  + FW D W    P    FP+ + LS K+ A V +CW  ENQTWD+ +RR   D
Subjt:  GHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLD

TrEMBL top hitse value%identityAlignment
A0A0V0ISM6 Putative ovule protein8.1e-0640.68Show/hide
Query:  NGHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE
        NG  + FWED+W  + P  ++FP+ ++L+ ++ A VAE W   NQ W++  RR F D E
Subjt:  NGHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE

A0A5D3BRF1 Uncharacterized protein1.4e-0542.86Show/hide
Query:  HIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE
        +I FW+D+     P S  FP+ + LS  K+A VAECW   + +W++G+RR  LD E
Subjt:  HIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE

A0A5D3BWG7 Transposon TX1 uncharacterized2.1e-0645.1Show/hide
Query:  EDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE
        +D W    P +S++ + Y++S+KK ALVA  W   NQ WD+G+RRR  D+E
Subjt:  EDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE

A0A6J1D884 uncharacterized protein LOC1110178193.5e-0948.28Show/hide
Query:  GHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE
        G  I FW D W  EA  +  FP+ Y +S KKEA+VA+CW    +TWD+G RR   D+E
Subjt:  GHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE

A0A6J1E196 uncharacterized protein LOC1110250195.6e-0742.86Show/hide
Query:  GHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLD
        G  + FW D W    P    FP+ + LS K+ A V +CW  ENQTWD+ +RR   D
Subjt:  GHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGGGCATCATATCCATTTCTGGGAGGATGCCTGGGAAACGGAGGCACCTTTCTCATCAATGTTCCCCAACTTTTATGTCTTATCAGCTAAGAAAGAGGCGCTTGTAGC
AGAATGTTGGAAGGGTGAGAATCAGACCTGGGATATGGGGATTAGAAGAAGATTTCTTGACAAAGAA
mRNA sequenceShow/hide mRNA sequence
AATGGGCATCATATCCATTTCTGGGAGGATGCCTGGGAAACGGAGGCACCTTTCTCATCAATGTTCCCCAACTTTTATGTCTTATCAGCTAAGAAAGAGGCGCTTGTAGC
AGAATGTTGGAAGGGTGAGAATCAGACCTGGGATATGGGGATTAGAAGAAGATTTCTTGACAAAGAA
Protein sequenceShow/hide protein sequence
NGHHIHFWEDAWETEAPFSSMFPNFYVLSAKKEALVAECWKGENQTWDMGIRRRFLDKE