; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014699 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014699
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold659:206635..207064
RNA-Seq ExpressionMS014699
SyntenyMS014699
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN79629.1 hypothetical protein VITISV_002584 [Vitis vinifera]8.7e-1633.1Show/hide
Query:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGE-GRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVF---LCSRGLNTHERFKK
        W+  FRR   D E++   GL+  +D + +     D   W +   G FT K  F+ L +  +       K +WN + P K+K F   +  + +NT++  + 
Subjt:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGE-GRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVF---LCSRGLNTHERFKK

Query:  RCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV
        R  + ALSP +C LC   EET+DH+F+HCS     WYI+F +
Subjt:  RCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV

RVW27598.1 Protein NRT1/ PTR family 8.3 [Vitis vinifera]2.5e-1535.86Show/hide
Query:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGEG-RDVIKWKIGSSGQFTTKETFINL---FRPRQVLNSLILKAIWNFRYPKKIKVFL---CSRGLNTHER
        W+L FRR   D E++   GL+  +D V L     D   W + SSG F+ K  F+ L   F P QV  S   K +WN + P K++ F+     + +NT++ 
Subjt:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGEG-RDVIKWKIGSSGQFTTKETFINL---FRPRQVLNSLILKAIWNFRYPKKIKVFL---CSRGLNTHER

Query:  FKKRCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV
         + R    ALSP +C LC    E+ DHIF+HCS     W+ +F +
Subjt:  FKKRCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV

RVW55658.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.1e-1533.1Show/hide
Query:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLG-EGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVF---LCSRGLNTHERFKK
        W+  FRR  FD E++   GL+  ++ +QL     D   W +  SG FT K  F+ LF      +    K +WN + P K+K F   +  + +NT++  + 
Subjt:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLG-EGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVF---LCSRGLNTHERFKK

Query:  RCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV
        R  + ALSP +C LC    E+ DH+F+HCS     W+ +F +
Subjt:  RCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV

RVW95847.1 putative ribonuclease H protein [Vitis vinifera]2.5e-1535.86Show/hide
Query:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGEG-RDVIKWKIGSSGQFTTKETFINL---FRPRQVLNSLILKAIWNFRYPKKIKVFL---CSRGLNTHER
        W+L FRR   D E++   GL+  +D V L     D   W + SSG F+ K  F+ L   F P QV  S   K +WN + P K++ F+     + +NT++ 
Subjt:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGEG-RDVIKWKIGSSGQFTTKETFINL---FRPRQVLNSLILKAIWNFRYPKKIKVFL---CSRGLNTHER

Query:  FKKRCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV
         + R    ALSP +C LC    E+ DHIF+HCS     W+ +F +
Subjt:  FKKRCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV

TYK07901.1 DUF21 domain-containing protein [Cucumis melo var. makuwa]1.7e-1937.4Show/hide
Query:  ELDSWLGLVNKIDVVQLGEGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCS---RGLNTHERFKKRCKNWALSPSVCS
        ELD+   ++  +      + RD +KW + ++G FT K TF+ L +    + + ++  IW  +  K++K FL S   R LNTH++ +K  ++  LSPS+C 
Subjt:  ELDSWLGLVNKIDVVQLGEGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCS---RGLNTHERFKKRCKNWALSPSVCS

Query:  LCNMDEETLDHIFIHCSFAQKAWYIIFNVFN
        LC  +EETLDH+F+HC+F +KAW  +F +F+
Subjt:  LCNMDEETLDHIFIHCSFAQKAWYIIFNVFN

TrEMBL top hitse value%identityAlignment
A0A438F6L0 Transposon TX1 uncharacterized 149 kDa protein5.5e-1633.1Show/hide
Query:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLG-EGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVF---LCSRGLNTHERFKK
        W+  FRR  FD E++   GL+  ++ +QL     D   W +  SG FT K  F+ LF      +    K +WN + P K+K F   +  + +NT++  + 
Subjt:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLG-EGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVF---LCSRGLNTHERFKK

Query:  RCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV
        R  + ALSP +C LC    E+ DH+F+HCS     W+ +F +
Subjt:  RCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV

A0A438KQT0 Transposon TX1 uncharacterized 149 kDa protein1.2e-1535.86Show/hide
Query:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGEG-RDVIKWKIGSSGQFTTKETFINL---FRPRQVLNSLILKAIWNFRYPKKIKVFL---CSRGLNTHER
        W+L FRR   D E++   GL+  +D V L     D   W + SSG F+ K  F+ L   F P QV  S   K +WN + P K++ F+     + +NT++ 
Subjt:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGEG-RDVIKWKIGSSGQFTTKETFINL---FRPRQVLNSLILKAIWNFRYPKKIKVFL---CSRGLNTHER

Query:  FKKRCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV
         + R    ALSP +C LC    E+ DHIF+HCS     W+ +F +
Subjt:  FKKRCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV

A0A5D3C7R2 DUF21 domain-containing protein8.2e-2037.4Show/hide
Query:  ELDSWLGLVNKIDVVQLGEGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCS---RGLNTHERFKKRCKNWALSPSVCS
        ELD+   ++  +      + RD +KW + ++G FT K TF+ L +    + + ++  IW  +  K++K FL S   R LNTH++ +K  ++  LSPS+C 
Subjt:  ELDSWLGLVNKIDVVQLGEGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCS---RGLNTHERFKKRCKNWALSPSVCS

Query:  LCNMDEETLDHIFIHCSFAQKAWYIIFNVFN
        LC  +EETLDH+F+HC+F +KAW  +F +F+
Subjt:  LCNMDEETLDHIFIHCSFAQKAWYIIFNVFN

A5AF89 Uncharacterized protein1.2e-1535.86Show/hide
Query:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGEG-RDVIKWKIGSSGQFTTKETFINL---FRPRQVLNSLILKAIWNFRYPKKIKVFL---CSRGLNTHER
        W+L FRR   D E++   GL+  +D V L     D   W + SSG F+ K  F+ L   F P QV  S   K +WN + P K++ F+     + +NT++ 
Subjt:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGEG-RDVIKWKIGSSGQFTTKETFINL---FRPRQVLNSLILKAIWNFRYPKKIKVFL---CSRGLNTHER

Query:  FKKRCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV
         + R    ALSP +C LC    E+ DHIF+HCS     W+ +F +
Subjt:  FKKRCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV

A5C3A7 Uncharacterized protein4.2e-1633.1Show/hide
Query:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGE-GRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVF---LCSRGLNTHERFKK
        W+  FRR   D E++   GL+  +D + +     D   W +   G FT K  F+ L +  +       K +WN + P K+K F   +  + +NT++  + 
Subjt:  WDLGFRRGRFDRELDSWLGLVNKIDVVQLGE-GRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVF---LCSRGLNTHERFKK

Query:  RCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV
        R  + ALSP +C LC   EET+DH+F+HCS     WYI+F +
Subjt:  RCKNWALSPSVCSLCNMDEETLDHIFIHCSFAQKAWYIIFNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.8e-0427.83Show/hide
Query:  IDVVQLGEGRDVIKWKIGSS--GQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCSRGLNTHERFKKRCKNWALS-PSVCSLCNMDEETLDH
        ID+  L    DV  W +       F++ +T+  L RPR  + S   K +W      K    +    L+     K R  +W +   + C LC++D E  DH
Subjt:  IDVVQLGEGRDVIKWKIGSS--GQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCSRGLNTHERFKKRCKNWALS-PSVCSLCNMDEETLDH

Query:  IFIHCSFAQKAWYII
        +F+ C FA   W+ +
Subjt:  IFIHCSFAQKAWYII

AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.7e-0529.13Show/hide
Query:  DVIKWKI---GSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCSRGLNTHERFKKRCKNWALS-PSVCSLCNMDEETLDHIFIHCSFAQ
        D   WK      S  F+T +T + L     ++     KA+W F+       F+C          + R ++W LS P+VC LCN  +E+  H+F  C F  
Subjt:  DVIKWKI---GSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCSRGLNTHERFKKRCKNWALS-PSVCSLCNMDEETLDHIFIHCSFAQ

Query:  KAW
          W
Subjt:  KAW

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.8e-0431.82Show/hide
Query:  KAIWNFRYPKKIKVFLCSRGLNTHERFKKRCKNWA-LSPSVCSLCNMDEETLDHIFIHCSFAQKAW
        KAIW F+       F+    +      K R  +W  + P +C  CN  +ET  H+F  C FA++ W
Subjt:  KAIWNFRYPKKIKVFLCSRGLNTHERFKKRCKNWA-LSPSVCSLCNMDEETLDHIFIHCSFAQKAW

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.4e-0533.03Show/hide
Query:  VQLGEGRDVIKWKIGSSGQ---FTTKETFINLFRPRQVLNSLILKAIW-NFRYPKKIKVFLCSRGLNTHERFKKRCK--NWALS-PSVCSLCNMDEETLD
        +Q+    D+  WK+G S     F++  T+I+L    + ++    KAIW   R PK   +      +N   R   R K  +W L  PS+C LCN  +ET  
Subjt:  VQLGEGRDVIKWKIGSSGQ---FTTKETFINLFRPRQVLNSLILKAIW-NFRYPKKIKVFLCSRGLNTHERFKKRCK--NWALS-PSVCSLCNMDEETLD

Query:  HIFIHCSFA
        H+F  C FA
Subjt:  HIFIHCSFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGTGTGACTGGGACCTTGGCTTTAGAAGAGGCCGTTTTGACAGAGAGCTAGACAGTTGGCTGGGTTTGGTCAACAAGATCGACGTGGTGCAATTGGGAGAAGGGAGAGA
TGTGATTAAATGGAAAATAGGAAGCTCGGGCCAGTTTACTACGAAGGAAACGTTCATAAACTTGTTTAGACCTCGACAAGTCCTGAATTCATTGATTCTGAAGGCTATTT
GGAACTTTAGATATCCAAAGAAGATAAAAGTCTTCTTGTGCTCAAGAGGCTTGAATACGCACGAAAGATTTAAAAAACGATGCAAAAACTGGGCCCTCTCCCCATCGGTG
TGCTCTCTATGCAACATGGACGAAGAAACGTTGGACCATATCTTTATTCATTGCTCCTTTGCCCAAAAGGCTTGGTATATAATTTTTAATGTCTTCAAT
mRNA sequenceShow/hide mRNA sequence
CAGTGTGACTGGGACCTTGGCTTTAGAAGAGGCCGTTTTGACAGAGAGCTAGACAGTTGGCTGGGTTTGGTCAACAAGATCGACGTGGTGCAATTGGGAGAAGGGAGAGA
TGTGATTAAATGGAAAATAGGAAGCTCGGGCCAGTTTACTACGAAGGAAACGTTCATAAACTTGTTTAGACCTCGACAAGTCCTGAATTCATTGATTCTGAAGGCTATTT
GGAACTTTAGATATCCAAAGAAGATAAAAGTCTTCTTGTGCTCAAGAGGCTTGAATACGCACGAAAGATTTAAAAAACGATGCAAAAACTGGGCCCTCTCCCCATCGGTG
TGCTCTCTATGCAACATGGACGAAGAAACGTTGGACCATATCTTTATTCATTGCTCCTTTGCCCAAAAGGCTTGGTATATAATTTTTAATGTCTTCAAT
Protein sequenceShow/hide protein sequence
QCDWDLGFRRGRFDRELDSWLGLVNKIDVVQLGEGRDVIKWKIGSSGQFTTKETFINLFRPRQVLNSLILKAIWNFRYPKKIKVFLCSRGLNTHERFKKRCKNWALSPSV
CSLCNMDEETLDHIFIHCSFAQKAWYIIFNVFN