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MS014700 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014700
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLINE-1 reverse transcriptase-like
Genome locationscaffold659:209008..209178
RNA-Seq ExpressionMS014700
SyntenyMS014700
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0006950 - response to stress (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS40543.1 hypothetical protein Acr_00g0069200 [Actinidia rufa]1.7e-0749.12Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        SKGG+LTL +   +S+P Y+ S+L  PK++ + +EKLMRDF+WNG ++ P  +LV W
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

RVW45478.1 MAP3K epsilon protein kinase 1 [Vitis vinifera]3.5e-0850.88Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        SKGGR+TL +    SIPIY+ SI+  PK+VI  +EK+ RDF+W GG+     +L+KW
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

RVW60765.1 Regulator of nonsense transcripts UPF2 [Vitis vinifera]1.7e-0749.12Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        SKGGR+TL +    S+PIY+ S+   PKTV+  +EK+ RDF+W GG      +LVKW
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

XP_009335445.1 PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]4.6e-0852.63Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        SKGGRLTL QF+  S+PIYY S+ + P  VI  +EKLM+ F+W G +     +LVKW
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

XP_030497604.1 uncharacterized protein LOC115713262 [Cannabis sativa]6.0e-0850.88Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        S+GGRLTL Q + +S PIY+ S+ +APK+V  ++EKLMRDF+W G +     +LV W
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

TrEMBL top hitse value%identityAlignment
A0A803PW65 Uncharacterized protein4.5e-0952.63Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        S+GGRLTL Q + +S+PIYY S+ +APK V+ ++EK+MRDF W GG      +LV W
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

A0A803PZS1 Uncharacterized protein2.6e-0954.39Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        S+GGRLTL Q + +S+PIYY S+ +APK VI ++EK+MRDF W GG      +LV W
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

A0A803QEA6 Uncharacterized protein9.9e-0950.88Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        S+GGRLTL Q + +S+PIYY S+ +APK V+  +EK+MR+F W GG      +LV W
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

A0A803QNN3 Uncharacterized protein2.6e-0956.36Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLV
        S+GGRLTL Q + +S+PIYY S+ +APK V+ S+EK+MRDF+W GG  M   +LV
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLV

A0A803QQM3 Uncharacterized protein9.9e-0950.88Show/hide
Query:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW
        S+GGRLTL Q + +S+PIY+ S+ +APK V+  +EK+MRDF W GG      +LV W
Subjt:  SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTAAAGGGGGACGCCTCACCTTGGCTCAATTTATCCATAATAGCATCCCCATTTATTATTTCTCGATCCTAGAAGCCCCCAAAACAGTGATTACATCTATGGAGAAGCT
TATGAGGGACTTTGTATGGAACGGAGGAAAGCATATGCCGATGGGAAACTTGGTTAAATGG
mRNA sequenceShow/hide mRNA sequence
TCTAAAGGGGGACGCCTCACCTTGGCTCAATTTATCCATAATAGCATCCCCATTTATTATTTCTCGATCCTAGAAGCCCCCAAAACAGTGATTACATCTATGGAGAAGCT
TATGAGGGACTTTGTATGGAACGGAGGAAAGCATATGCCGATGGGAAACTTGGTTAAATGG
Protein sequenceShow/hide protein sequence
SKGGRLTLAQFIHNSIPIYYFSILEAPKTVITSMEKLMRDFVWNGGKHMPMGNLVKW