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MS014701 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014701
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold659:209864..210164
RNA-Seq ExpressionMS014701
SyntenyMS014701
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW12714.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.3e-1041.35Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA
        VK F+W + ++  NT + LQ   PH ALSP+IC LC+++ E VDH FLHCS     W+ +  L    +  PR+I D  FT  +G  + K +  VLW  A 
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA

Query:  KALL
         AL+
Subjt:  KALL

RVW52490.1 putative ribonuclease H protein [Vitis vinifera]1.0e-1042.31Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA
        VK F+W + ++  NT + LQ   PH ALSP+IC LC+++ E VDH FLHCS     W+ +  L    +  PR+I D  FT  +G  + K K  VLW  A 
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA

Query:  KALL
         AL+
Subjt:  KALL

RVW92607.1 putative ribonuclease H protein [Vitis vinifera]2.3e-1041.35Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA
        VK F+W + ++  NT + LQ   PH ALSP+IC LC+++ E VDH FLHCS     W+ +  L    +  PR+I D  FT  +G  + K +  VLW  A 
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA

Query:  KALL
         AL+
Subjt:  KALL

RVW96954.1 DNA-directed RNA polymerase III subunit 2 [Vitis vinifera]2.3e-1041.35Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA
        VK F+W + ++  NT + LQ   PH ALSP+IC LC+++ E VDH FLHCS     W+ +  L    +  PR+I D  FT  +G  + K +  VLW  A 
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA

Query:  KALL
         AL+
Subjt:  KALL

TYK31299.1 protein FAM91A1 [Cucumis melo var. makuwa]1.7e-1348.89Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD-FTEGSGGNAFKGK
        VK FLW++ YRS N   KLQ+  P+ +LSP IC LCL+ +E  DH FLHC FA + WN +  L     CLP+ IDD   +G  G +F GK
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD-FTEGSGGNAFKGK

TrEMBL top hitse value%identityAlignment
A0A438EXL3 Putative ribonuclease H protein4.9e-1142.31Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA
        VK F+W + ++  NT + LQ   PH ALSP+IC LC+++ E VDH FLHCS     W+ +  L    +  PR+I D  FT  +G  + K K  VLW  A 
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA

Query:  KALL
         AL+
Subjt:  KALL

A0A438EZ36 LINE-1 retrotransposable element ORF2 protein1.1e-1041.35Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA
        VK F+W + ++  NT + LQ   PH ALSP+IC LC+++ E VDH FLHCS     W+ +  L    +  PR+I D  FT  +G  + K +  VLW  A 
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA

Query:  KALL
         AL+
Subjt:  KALL

A0A438I2T6 Transposon TX1 uncharacterized 149 kDa protein1.1e-1041.35Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA
        VK F+W + ++  NT + LQ   PH ALSP+IC LC+++ E VDH FLHCS     W+ +  L    +  PR+I D  FT  +G  + K +  VLW  A 
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA

Query:  KALL
         AL+
Subjt:  KALL

A0A5D3E632 Protein FAM91A18.1e-1448.89Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD-FTEGSGGNAFKGK
        VK FLW++ YRS N   KLQ+  P+ +LSP IC LCL+ +E  DH FLHC FA + WN +  L     CLP+ IDD   +G  G +F GK
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD-FTEGSGGNAFKGK

A5BTG1 zf-RVT domain-containing protein1.1e-1041.35Show/hide
Query:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA
        VK F+W + ++  NT + LQ   PH ALSP+IC LC+++ E VDH FLHCS     W+ +  L    +  PR+I D  FT  +G  + K +  VLW  A 
Subjt:  VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDH-FLHCSFATEAWNYV-ALLDFSFCLPRNIDD--FTEGSGGNAFKGKTYVLWNCAA

Query:  KALL
         AL+
Subjt:  KALL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAAAAGTCTTCCTTTGGACTATTTTCTACCGGAGCACGAACACGGCAGAGAAACTACAAAAGGGACTTCCACATTTGGCTCTTTCTCCCCATATTTGTGCTTTGTGCTT
GCAAAATTCAGAAAATGTGGATCACTTCTTGCATTGTTCTTTTGCTACAGAGGCATGGAATTATGTTGCCCTCTTAGACTTCTCCTTTTGTCTCCCAAGGAATATAGATG
ACTTCACAGAAGGCTCTGGTGGAAACGCATTCAAAGGAAAAACTTATGTCCTTTGGAACTGTGCAGCAAAGGCTCTCCTT
mRNA sequenceShow/hide mRNA sequence
GTAAAAGTCTTCCTTTGGACTATTTTCTACCGGAGCACGAACACGGCAGAGAAACTACAAAAGGGACTTCCACATTTGGCTCTTTCTCCCCATATTTGTGCTTTGTGCTT
GCAAAATTCAGAAAATGTGGATCACTTCTTGCATTGTTCTTTTGCTACAGAGGCATGGAATTATGTTGCCCTCTTAGACTTCTCCTTTTGTCTCCCAAGGAATATAGATG
ACTTCACAGAAGGCTCTGGTGGAAACGCATTCAAAGGAAAAACTTATGTCCTTTGGAACTGTGCAGCAAAGGCTCTCCTT
Protein sequenceShow/hide protein sequence
VKVFLWTIFYRSTNTAEKLQKGLPHLALSPHICALCLQNSENVDHFLHCSFATEAWNYVALLDFSFCLPRNIDDFTEGSGGNAFKGKTYVLWNCAAKALL