; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014702 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014702
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3
Genome locationscaffold659:210649..210822
RNA-Seq ExpressionMS014702
SyntenyMS014702
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154414.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]3.1e-2094.83Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        ML LHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDL +PQ
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

XP_022154415.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Momordica charantia]3.1e-2094.83Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        ML LHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDL +PQ
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

XP_022154416.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X3 [Momordica charantia]3.1e-2094.83Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        ML LHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDL +PQ
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

XP_038887984.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Benincasa hispida]1.0e-0760.34Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        +L L EEKERVL KYK LFTDE++G I+KY ++SFEKSK +RK TK ++DN +L + Q
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

XP_038887986.1 pentatricopeptide repeat-containing protein At4g21190 isoform X3 [Benincasa hispida]1.0e-0760.34Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        +L L EEKERVL KYK LFTDE++G I+KY ++SFEKSK +RK TK ++DN +L + Q
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

TrEMBL top hitse value%identityAlignment
A0A0A0K5V0 Uncharacterized protein1.5e-0762.07Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        ML L EEKERVL KYK LF DE++GP++KY +ISFEKSKR+RK TK ++DN +L + +
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

A0A5A7SLC0 Pentatricopeptide repeat-containing protein2.3e-0556.9Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        ML L EEKERVL KYK LF DE++  ++KY ++SFEK KR+RK TK S+DN +L + +
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

A0A6J1DJJ2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X21.5e-2094.83Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        ML LHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDL +PQ
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

A0A6J1DM10 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X11.5e-2094.83Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        ML LHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDL +PQ
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

A0A6J1DNN5 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X31.5e-2094.83Show/hide
Query:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ
        ML LHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDL +PQ
Subjt:  MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGCTTGCATGAAGAGAAAGAGAGGGTGTTAGAGAAGTATAAAGATCTTTTTACAGATGAAAGGAAAGGACCCATCCAGAAATATAACAAGATTTCGTTTGAGAA
ATCGAAGAGAAGAAGAAAATTGACAAAGGTTTCGAAAGACAATGGCGATCTTACGCAGCCTCAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGCTTGCATGAAGAGAAAGAGAGGGTGTTAGAGAAGTATAAAGATCTTTTTACAGATGAAAGGAAAGGACCCATCCAGAAATATAACAAGATTTCGTTTGAGAA
ATCGAAGAGAAGAAGAAAATTGACAAAGGTTTCGAAAGACAATGGCGATCTTACGCAGCCTCAA
Protein sequenceShow/hide protein sequence
MLSLHEEKERVLEKYKDLFTDERKGPIQKYNKISFEKSKRRRKLTKVSKDNGDLTQPQ