CuGenDBv2

Gene ID	MS014726
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome location	scaffold198:32786..38342
RNA-Seq Expression	MS014726
Synteny	MS014726
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR022776 - TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain IPR032845 - U11/U12 small nuclear ribonucleoprotein 48kDa protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]

0.0e+00

99.08

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Query:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL
        LRAMNPALPFPNQ+FPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL
Subjt:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL

Query:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN
        FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN
Subjt:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN

Query:  FVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGF
        FVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYS IVLRSLLGTKLVID HLMTWIIANSPRYGVVIDVAMRDHIL LFRLCFMAILKEAVGF
Subjt:  FVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGF

Query:  QIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQ
        QIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQ
Subjt:  QIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQ

Query:  EVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKT
        EVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEH YISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKT
Subjt:  EVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKT

Query:  REELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQ
        REELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQ
Subjt:  REELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQ

Query:  SYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPSSSRSAG
        SYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAR+ITSSSSNFHGFRSPSSSRSAG
Subjt:  SYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPSSSRSAG

Query:  GSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD
        GSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRY PTEWHDQLEDDYSTGSRYVNPD
Subjt:  GSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

XP_022927551.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita moschata]

0.0e+00

73.67

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Query:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL
        LRAMNP+LP  N  +P F P NPNPN    P FS  ES++ PLDLSSSL SL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FD RHR+PPHSL
Subjt:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL

Query:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN
        F HSLLC SAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECAN
Subjt:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN

Query:  FVSKD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAV
        FV  D   REM+S+ K   +LPS+LWALR+EVEMWNDYP++YS IV+RS+LG+++ +D  L TWIIANSPRYGV+IDVAMRDHI LLFRLCFMAI KEA+
Subjt:  FVSKD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAV

Query:  GFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQN
        GFQIALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE NGKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDT++
Subjt:  GFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQN

Query:  VKSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHD
        V  K L ++V N   V+GEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQ+HD
Subjt:  VKSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHD

Query:  EGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKH
        E   KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  +H
Subjt:  EGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKH

Query:  S-SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFR
          SSHS+KQS YD+RYSAS KP KG+YGHYGS EDE KSVG DKYD+  Y+R  DRSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFR
Subjt:  S-SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFR

Query:  SPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD
        S SSSRS G SSA KDGHK RA D+WKR+TA+NH S SS+LN FNDRY P++ HDQLEDD+STG RYVNPD
Subjt:  SPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

XP_023004252.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucurbita maxima]

8.8e-309

73.44

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Query:  MNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N  FP F P NPNPN      FS  +S++ PLDLSSSLSSL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+PPHSLF H
Subjt:  MNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQ
         D   REM+S+ K  R+LPS+LWALR EVEMWNDYP++YS IV+RS+LG+++ +D  L TWIIANSPRYGV+IDVAMRDHI LLFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE +GKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDTQ+V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT
        K+L  +V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEHNYISQRACEERKRRC+YRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT

Query:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS
         KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + HSS
Subjt:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS

Query:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPS
        SHS+KQS YD+RYSAS KP KG+ GHYGS EDE K V KDKYD+  Y+R  +RSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS S
Subjt:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPS

Query:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD
        SSRS G SSA KD HK RA D+WKR+TA+NH S S +LNSFNDRY P++ HDQLEDD+S G RYVNPD
Subjt:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

XP_023530557.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucurbita pepo subsp. pepo]

0.0e+00

74.51

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Query:  MNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N  FPNFL  NPNPN    P FS  ES+D PLDLSSSLSSL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+PPHSLF H
Subjt:  MNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQ
         D   REM+ + K  R+LPS+LWALR+EVEMWNDYP++YS IV+RS+LG+++ +D  L TWIIANSPRYGV+IDVAMRDHI LLFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE NGKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+ SDTQ+V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE-G
        K L ++V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEHNYI QRACEERKRRCNYRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE-G

Query:  TGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HS
          KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + H+
Subjt:  TGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HS

Query:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSP
        SSHS+KQS YD+RYSAS KP KG+YGHYGS EDE KSVGKDKYD+  Y+R  DRSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS 
Subjt:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSP

Query:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD
        SSSRS G SSA KDGHK RA D+WKR+TA+NH S SS+LNSFNDRY P++ HDQLEDD+STG RYVNPD
Subjt:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

XP_038879303.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida]

7.0e-309

73.82

Show/hide

Query:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL
        +RAMNP+ PFPNQ FP+ LP NPNPN  + P+ SH + Q+ PLDL SSLSSLKNLI+VANQTLQSLSYL+LT  PS  G+DS  VQC FDRRHR+PPHSL
Subjt:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL

Query:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHS-LQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECA
        FRHSL+CPSA  PRIDPT LL SL YP + L SSR L+NEKRF Q LPDSDADLCFSLNDF D++SNFFY+DCP VV   + DE+SKVFTLPR+LAV CA
Subjt:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHS-LQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECA

Query:  NFVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVG
        NF+  D  EM+S  K  RILPS+LW LR+EVE W++YP MYSF+VLRS+LG+++ +D HLMTWIIANSPRYG V+DVAMRDH+ LLFRLCFMAI KEA+G
Subjt:  NFVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVG

Query:  FQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNV
        FQIALENGN ME G    SG+  F CP+LIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAA  LLLLP EQKP      G GSHN E++CSDTQ+V
Subjt:  FQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNV

Query:  KSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE
        K   L Q+V N  NVTGEETV C  I VSQVAAA+AALHERFLLEEKIK +RFSHLQTKYQ VSE+NYISQRACEERKRRCNYRPIIEHDGLPKQQ H+E
Subjt:  KSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE

Query:  GTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHS
         T KTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVK  EERG K EQP +HNI R+IIAD +TKGSND++G A+ S
Subjt:  GTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHS

Query:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSP
        SSHSKKQS YD  YS S KPQK  YGH GS EDE KS  KDKYD+  ++R  DRSSSPS SHK  RY SDRDDEV  +TRHHE RK++SSSSN+HGFRS 
Subjt:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSP

Query:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSR
        SSSRS GGSSA KDGHK RA D+ KR+ A+NH S+  + NSFNDRY P+E HD+LEDDYST SR
Subjt:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSR

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BCH1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

2.9e-289

70.16

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Query:  LRAMNPALPF-PNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHS
        +RA+NP+LPF PNQ FP+FLP NPNPN  +  + SHSESQ   LDL SS SSL  LIH+ANQTL+SLSYL+    PS   + S  + C FDRRHR+PPHS
Subjt:  LRAMNPALPF-PNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHS

Query:  LFRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECA
        LFRHSLLCPSA    IDPT L  SLLYP +L SS  L+NE RF Q LPDSDADLCFSL D+ D++SNFFY DCPGVV L + DEMSKVFTLPRVLAV CA
Subjt:  LFRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECA

Query:  NFVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVG
        NFV  D  EM S     RILPS+LW LR+EVE+WNDYP  YSF+VLRS+LG++++++ HLMTWII NSPRYGVVIDVA+RDHI LLFRLCFMAI KEA+G
Subjt:  NFVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVG

Query:  FQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNV
        FQ+ALE GN ME GS+    +  FKCP+LIQVLMWLASQLSVLYGETNGKFFA++MLRQCILDAA   LLLP EQK       G G H+ E +CSD Q+V
Subjt:  FQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNV

Query:  KSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE
        K   L Q+V N  NVTG ETV C VI VSQVAAA+AALHERFLLEEKIKA+RF+HLQTKYQ VSE+NYISQRACEERKRRCNYRPIIEHDGLPKQQ+++E
Subjt:  KSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE

Query:  GTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHS
           KTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVK  EERG+K EQP++HNI R+I+AD +T+GSND  G A+HS
Subjt:  GTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHS

Query:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSP
        S HSKKQS++D RY  S+KPQKG Y HYGS EDE K   KDKYD+  Y+R  D+SS PS SHK  RY +DRDDEVP +TRHHE +K+ SSSS  HG RS 
Subjt:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSP

Query:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSR
        SSSRS  GSSA KD HK RA D+WKR+TA+NH S+  + NSF+DRY P+E HD+LED+YST SR
Subjt:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSR

A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

0.0e+00

99.08

Show/hide

Query:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL
        LRAMNPALPFPNQ+FPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL
Subjt:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL

Query:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN
        FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN
Subjt:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN

Query:  FVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGF
        FVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYS IVLRSLLGTKLVID HLMTWIIANSPRYGVVIDVAMRDHIL LFRLCFMAILKEAVGF
Subjt:  FVSKDGREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGF

Query:  QIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQ
        QIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQ
Subjt:  QIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQ

Query:  EVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKT
        EVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEH YISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKT
Subjt:  EVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKT

Query:  REELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQ
        REELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQ
Subjt:  REELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQ

Query:  SYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPSSSRSAG
        SYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEAR+ITSSSSNFHGFRSPSSSRSAG
Subjt:  SYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPSSSRSAG

Query:  GSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD
        GSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRY PTEWHDQLEDDYSTGSRYVNPD
Subjt:  GSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

A0A6J1EI02 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

0.0e+00

73.67

Show/hide

Query:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL
        LRAMNP+LP  N  +P F P NPNPN    P FS  ES++ PLDLSSSL SL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FD RHR+PPHSL
Subjt:  LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSL

Query:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN
        F HSLLC SAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECAN
Subjt:  FRHSLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECAN

Query:  FVSKD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAV
        FV  D   REM+S+ K   +LPS+LWALR+EVEMWNDYP++YS IV+RS+LG+++ +D  L TWIIANSPRYGV+IDVAMRDHI LLFRLCFMAI KEA+
Subjt:  FVSKD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAV

Query:  GFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQN
        GFQIALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE NGKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDT++
Subjt:  GFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQN

Query:  VKSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHD
        V  K L ++V N   V+GEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQ+HD
Subjt:  VKSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHD

Query:  EGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKH
        E   KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  +H
Subjt:  EGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKH

Query:  S-SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFR
          SSHS+KQS YD+RYSAS KP KG+YGHYGS EDE KSVG DKYD+  Y+R  DRSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFR
Subjt:  S-SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFR

Query:  SPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD
        S SSSRS G SSA KDGHK RA D+WKR+TA+NH S SS+LN FNDRY P++ HDQLEDD+STG RYVNPD
Subjt:  SPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

A0A6J1KPX5 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2

4.3e-309

73.44

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Query:  MNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N  FP F P NPNPN      FS  +S++ PLDLSSSLSSL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+PPHSLF H
Subjt:  MNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQ
         D   REM+S+ K  R+LPS+LWALR EVEMWNDYP++YS IV+RS+LG+++ +D  L TWIIANSPRYGV+IDVAMRDHI LLFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE +GKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDTQ+V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT
        K+L  +V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEHNYISQRACEERKRRC+YRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGT

Query:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS
         KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + HSS
Subjt:  GKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HSS

Query:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPS
        SHS+KQS YD+RYSAS KP KG+ GHYGS EDE K V KDKYD+  Y+R  +RSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS S
Subjt:  SHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPS

Query:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD
        SSRS G SSA KD HK RA D+WKR+TA+NH S S +LNSFNDRY P++ HDQLEDD+S G RYVNPD
Subjt:  SSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

A0A6J1KU07 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1

1.1e-307

73.34

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Query:  MNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH
        MNP+LP  N  FP F P NPNPN      FS  +S++ PLDLSSSLSSL+NLIHVANQTLQSLSYL+L + PS   DDS FVQC FDRRHR+PPHSLF H
Subjt:  MNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRH

Query:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS
        SLLCPSAP PRIDPT LL SLLYP +LQSSR+L+NEKRF Q +PDSDADLCFSLND++D SSNFFY+DCPGVV L ++DEMSKVFTLPRVLAVECANFV 
Subjt:  SLLCPSAPQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVS

Query:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQ
         D   REM+S+ K  R+LPS+LWALR EVEMWNDYP++YS IV+RS+LG+++ +D  L TWIIANSPRYGV+IDVAMRDHI LLFRLCFMAI KEA+GFQ
Subjt:  KD--GREMESAWKETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQ

Query:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS
        IALENGN ME G    SG+ +FKCP+L+QVL+WLASQLSVLYGE +GKFFAI+MLRQ IL AASGL LLP EQK         GSHN  S+CSDTQ+V  
Subjt:  IALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKP------GHGSHNQESTCSDTQNVKS

Query:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE-G
        K+L  +V N   VTGEETV C VIFVSQVAAA+AALHERFLLEEKIKA+RFSHLQTK+QLVSEHNYISQRACEERKRRC+YRPIIEHDGLPKQQ+HDE  
Subjt:  KRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDE-G

Query:  TGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HS
          KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EIMKAGGIG FVK +EERG+K EQP +H I RD IAD +TKGSN +YG  + HS
Subjt:  TGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAK-HS

Query:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSP
        SSHS+KQS YD+RYSAS KP KG+ GHYGS EDE K V KDKYD+  Y+R  +RSSSPS SHK  RY SDRDDE P +TRHH++R ++SSSSN+HGFRS 
Subjt:  SSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSSSNFHGFRSP

Query:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD
        SSSRS G SSA KD HK RA D+WKR+TA+NH S S +LNSFNDRY P++ HDQLEDD+S G RYVNPD
Subjt:  SSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

SwissProt top hits

e value

%identity

Alignment

Q9M8X2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein

4.7e-119

39.92

Show/hide

Query:  PALPF---PNQN-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD
        P+LP    PN N F ++ P N NPN F  P          +S   S     +LS +LSSLK+L+    +TL SLS  L+L  +     D++  FV+C FD
Subjt:  PALPF---PNQN-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD

Query:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT
          H +PP +LF HSL CP+     +D  HLL S   Y ++L+   +L         L + D DLC SL+D AD  SNFFY DCPG V   + D   +  T
Subjt:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT

Query:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRL
        LP VL+VEC++FV  D +  +    K   +LPS+L A++NE++ W D+P+ YS  VL S++G+K+V    L  WI+ NS RYGV+ID  MRDHI LLFRL
Subjt:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRL

Query:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS
        C  + +KEA GF++   +  ++ +  ++   S  F+CPV IQVL WLASQL+VLYGE NGKFFA+ M +QCI+++AS ++L  LE      S   E    
Subjt:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS

Query:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDG
        D   +++K ++ E + ++N +G E      +  VI VS+V+AA+AAL+ER LLEEKI+AVR++   T+YQ  +E  +++ +A EER RRC+YRPII+HDG
Subjt:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDG

Query:  LPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSN
         P+Q++ ++   K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIGCF     E+G+  +        R  I ++  +  +
Subjt:  LPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSN

Query:  DTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSS
        D   +   +    K ++  D  Y   N+    +   +    DE  S    +    R Y+  DR        +++++   RDDE  T+T+ H       S 
Subjt:  DTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSS

Query:  SNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTE
         N+   R  SSS            +K++  D + R +           N F DRYIPTE
Subjt:  SNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G04160.1 unknown protein

3.3e-120

39.92

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Query:  PALPF---PNQN-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD
        P+LP    PN N F ++ P N NPN F  P          +S   S     +LS +LSSLK+L+    +TL SLS  L+L  +     D++  FV+C FD
Subjt:  PALPF---PNQN-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD

Query:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT
          H +PP +LF HSL CP+     +D  HLL S   Y ++L+   +L         L + D DLC SL+D AD  SNFFY DCPG V   + D   +  T
Subjt:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT

Query:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRL
        LP VL+VEC++FV  D +  +    K   +LPS+L A++NE++ W D+P+ YS  VL S++G+K+V    L  WI+ NS RYGV+ID  MRDHI LLFRL
Subjt:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRL

Query:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS
        C  + +KEA GF++   +  ++ +  ++   S  F+CPV IQVL WLASQL+VLYGE NGKFFA+ M +QCI+++AS ++L  LE      S   E    
Subjt:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS

Query:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDG
        D   +++K ++ E + ++N +G E      +  VI VS+V+AA+AAL+ER LLEEKI+AVR++   T+YQ  +E  +++ +A EER RRC+YRPII+HDG
Subjt:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDG

Query:  LPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSN
         P+Q++ ++   K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIGCF     E+G+  +        R  I ++  +  +
Subjt:  LPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSN

Query:  DTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSS
        D   +   +    K ++  D  Y   N+    +   +    DE  S    +    R Y+  DR        +++++   RDDE  T+T+ H       S 
Subjt:  DTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITSSS

Query:  SNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTE
         N+   R  SSS            +K++  D + R +           N F DRYIPTE
Subjt:  SNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTE

AT3G04160.2 unknown protein

5.9e-117

39.55

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Query:  PALPF---PNQN-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD
        P+LP    PN N F ++ P N NPN F  P          +S   S     +LS +LSSLK+L+    +TL SLS  L+L  +     D++  FV+C FD
Subjt:  PALPF---PNQN-FPNFLPQNPNPNLFVSP---------EFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSY-LSLTRNPSDNGDDSD-FVQCAFD

Query:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT
          H +PP +LF HSL CP+     +D  HLL S   Y ++L+   +L         L + D DLC SL+D AD  SNFFY DCPG V   + D   +  T
Subjt:  RRHRLPPHSLFRHSLLCPSAPQPRIDPTHLLHSL-LYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFT

Query:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRL
        LP VL+VEC++FV  D +  +    K   +LPS+L A++NE++ W D+P+ YS  VL S++G+K+V    L  WI+ NS RYGV+ID  MRDHI LLFRL
Subjt:  LPRVLAVECANFVSKDGREMESAW-KETRILPSELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRL

Query:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS
        C  + +KEA GF++   +  ++ +  ++   S  F+CPV IQVL WLASQL+VLYGE NGKFFA+ M +QCI+++AS ++L  LE      S   E    
Subjt:  CFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCS

Query:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSE--HNYISQRACEERKRRCNYRPIIEH
        D   +++K ++ E + ++N +G E      +  VI VS+V+AA+AAL+ER LLEEKI+AVR++   T+YQ +    H  +      ER RRC+YRPII+H
Subjt:  DTQNVKSKRLVQEVRNYDNVTGEE----TVTCTVIFVSQVAAAIAALHERFLLEEKIKAVRFSHLQTKYQLVSE--HNYISQRACEERKRRCNYRPIIEH

Query:  DGLPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKG
        DG P+Q++ ++   K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY EEI  AGGIGCF     E+G+  +        R  I ++  + 
Subjt:  DGLPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKRSEERGVKYEQPAEHNIKRDIIADEYTKG

Query:  SNDTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITS
         +D   +   +    K ++  D  Y   N+    +   +    DE  S    +    R Y+  DR        +++++   RDDE  T+T+ H       
Subjt:  SNDTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRYLSDRDDEVPTKTRHHEARKITS

Query:  SSSNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTE
        S  N+   R  SSS            +K++  D + R +           N F DRYIPTE
Subjt:  SSSNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CTTCGAGCCATGAACCCTGCTCTTCCATTTCCCAACCAAAATTTCCCAAATTTTCTGCCCCAAAACCCTAACCCTAATTTATTTGTCAGCCCTGAATTCTCACATTCTGA
GTCTCAAGATCTTCCACTCGACTTGTCTTCTTCGCTCTCCTCCCTCAAAAACCTCATCCATGTCGCCAATCAGACCCTTCAATCTCTCTCCTACCTCAGCCTCACCCGAA
ACCCATCTGATAATGGCGACGATTCCGACTTCGTTCAGTGTGCTTTTGATCGGCGCCACCGTCTGCCGCCGCATTCTCTCTTCCGCCACTCCCTCCTCTGCCCTTCCGCT
CCCCAGCCTCGAATTGACCCGACCCACCTCCTCCACTCCTTGCTTTACCCCCACTCTCTTCAATCATCTCGTGATTTGATTAATGAGAAGCGTTTCCATCAAGCTCTGCC
GGATTCTGATGCCGACCTTTGCTTCTCTCTCAATGATTTTGCGGATAGTAGTTCCAATTTCTTCTATGTTGATTGCCCTGGTGTGGTTACCTTGTGTGACCAGGATGAAA
TGTCCAAGGTTTTCACTCTTCCTCGTGTTTTGGCTGTTGAATGTGCAAATTTTGTCAGTAAGGACGGTCGAGAGATGGAGAGTGCGTGGAAGGAGACTCGAATACTTCCC
TCCGAGTTGTGGGCTCTTAGAAATGAGGTTGAAATGTGGAATGACTATCCCACTATGTATTCGTTCATTGTTCTCCGTTCTCTATTGGGCACAAAATTGGTCATTGACGG
CCATTTGATGACATGGATCATTGCGAATTCGCCTCGGTATGGTGTTGTTATTGATGTTGCTATGAGGGATCATATACTTCTGCTGTTCAGGCTGTGTTTTATGGCAATCT
TAAAAGAAGCTGTGGGATTTCAGATTGCTCTGGAAAATGGAAATGAAATGGAGGATGGATCCCTAATTATCTCAGGCAGCCACAATTTTAAGTGTCCAGTTTTGATTCAA
GTATTAATGTGGCTAGCATCTCAGCTTTCTGTGTTGTATGGGGAAACAAACGGGAAGTTCTTTGCCATTCACATGCTTAGACAATGTATATTAGATGCTGCATCAGGCTT
GTTACTTTTACCACTGGAACAAAAGCCGGGACATGGTTCTCATAATCAGGAATCTACCTGTAGTGACACACAGAATGTGAAGTCGAAAAGATTGGTTCAGGAAGTTAGAA
ATTATGACAATGTTACTGGAGAAGAAACTGTTACTTGTACTGTGATTTTTGTGTCCCAAGTGGCTGCGGCTATTGCAGCATTGCATGAACGTTTCCTACTTGAAGAAAAG
ATCAAGGCTGTACGCTTTTCTCATCTGCAAACTAAATATCAGCTGGTTTCTGAGCATAACTATATCTCTCAAAGAGCTTGTGAAGAGCGTAAAAGACGTTGCAACTATAG
GCCTATAATTGAGCATGATGGACTTCCAAAGCAGCAGGCTCATGATGAGGGTACAGGGAAGACCAAAACAAGGGAGGAATTGTTAGCTGAAGAAAGGGATTATAAACGTC
GAAGAATGTCATACCGTGGAAAAAAGGCAAAGCGATCAACTTTACAGGTTACAAGAGATATTATTGAGGAATACATGGAGGAAATTATGAAAGCTGGAGGAATTGGGTGC
TTTGTTAAGAGATCTGAAGAGAGAGGGGTAAAATATGAACAACCAGCTGAGCATAACATTAAAAGAGATATTATTGCTGATGAATACACAAAAGGAAGCAACGACACATA
TGGAGCAGCCAAACATAGCTCAAGTCATTCCAAGAAGCAGTCTTACTATGATGACAGATATTCAGCTTCCAATAAGCCACAAAAAGGTCAGTATGGGCACTATGGCTCTC
TAGAAGATGAAGGGAAAAGTGTCGGTAAGGACAAATATGATCAAGGTCGCTATTATAGATCCTTAGATCGAAGCAGTAGTCCTAGCCTGTCGCACAAACGGAATAGATAT
CTAAGTGATCGAGATGATGAGGTGCCAACGAAAACCAGGCATCATGAAGCAAGAAAAATAACTTCTAGCAGTTCTAATTTTCATGGTTTTAGGTCACCTTCATCCTCCAG
ATCTGCCGGTGGTTCAAGTGCAATGAAGGATGGTCATAAATCGAGAGCTGGTGATAATTGGAAAAGGAGCACGGCTAATAATCATGGTTCAAAGTCTTCGATGCTTAATT
CATTTAATGATAGGTACATCCCCACCGAATGGCATGACCAATTGGAAGATGATTACTCCACCGGCAGCAGATATGTAAATCCAGAT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

LRAMNPALPFPNQNFPNFLPQNPNPNLFVSPEFSHSESQDLPLDLSSSLSSLKNLIHVANQTLQSLSYLSLTRNPSDNGDDSDFVQCAFDRRHRLPPHSLFRHSLLCPSA
PQPRIDPTHLLHSLLYPHSLQSSRDLINEKRFHQALPDSDADLCFSLNDFADSSSNFFYVDCPGVVTLCDQDEMSKVFTLPRVLAVECANFVSKDGREMESAWKETRILP
SELWALRNEVEMWNDYPTMYSFIVLRSLLGTKLVIDGHLMTWIIANSPRYGVVIDVAMRDHILLLFRLCFMAILKEAVGFQIALENGNEMEDGSLIISGSHNFKCPVLIQ
VLMWLASQLSVLYGETNGKFFAIHMLRQCILDAASGLLLLPLEQKPGHGSHNQESTCSDTQNVKSKRLVQEVRNYDNVTGEETVTCTVIFVSQVAAAIAALHERFLLEEK
IKAVRFSHLQTKYQLVSEHNYISQRACEERKRRCNYRPIIEHDGLPKQQAHDEGTGKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGC
FVKRSEERGVKYEQPAEHNIKRDIIADEYTKGSNDTYGAAKHSSSHSKKQSYYDDRYSASNKPQKGQYGHYGSLEDEGKSVGKDKYDQGRYYRSLDRSSSPSLSHKRNRY
LSDRDDEVPTKTRHHEARKITSSSSNFHGFRSPSSSRSAGGSSAMKDGHKSRAGDNWKRSTANNHGSKSSMLNSFNDRYIPTEWHDQLEDDYSTGSRYVNPD

MS014726 (gene) of Bitter gourd (TR) v1 genome