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MS014727 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014727
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpentatricopeptide repeat-containing protein At2g15690-like
Genome locationscaffold198:84061..84195
RNA-Seq ExpressionMS014727
SyntenyMS014727
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061500.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.9e-0583.33Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGY +NGEGD+G+ LFEQMKNVGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
TYK10773.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]8.3e-0580Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGY +NGEGD+G+ LFE+MKNVGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
XP_008459269.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis melo]8.3e-0580Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGY +NGEGD+G+ LFE+MKNVGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
XP_022154624.1 pentatricopeptide repeat-containing protein At2g15690-like [Momordica charantia]5.8e-0690Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGYA+NGEGDDGV LFEQMK VGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
XP_038889181.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benincasa hispida]1.3e-0586.67Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGY  NGEGDDG+ LFEQMKNVGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
TrEMBL top hitse value%identityAlignment
A0A1S3C9A6 pentatricopeptide repeat-containing protein At2g15690-like4.0e-0580Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGY +NGEGD+G+ LFE+MKNVGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
A0A5A7V2K9 Pentatricopeptide repeat-containing protein1.4e-0583.33Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGY +NGEGD+G+ LFEQMKNVGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
A0A5D3CFT5 Pentatricopeptide repeat-containing protein4.0e-0580Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGY +NGEGD+G+ LFE+MKNVGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
A0A6J1DMP2 pentatricopeptide repeat-containing protein At2g15690-like2.8e-0690Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGYA+NGEGDDGV LFEQMK VGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
A0A6J1HQH5 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like6.9e-0580Show/hide
Query:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
        LMIKGY +NGEGD G+ LFE+MKNVGLQPN
Subjt:  LMIKGYAKNGEGDDGVVLFEQMKNVGLQPN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATCATATCAAACCACAATTAACAAACAAGGTTGAAGCTGATGGTTTGATGATTAAGGGGTATGCAAAGAATGGGGAAGGAGATGATGGGGTGGTTTTGTTCGAGCAAAT
GAAAAATGTGGGATTGCAGCCAAAT
mRNA sequenceShow/hide mRNA sequence
TATCATATCAAACCACAATTAACAAACAAGGTTGAAGCTGATGGTTTGATGATTAAGGGGTATGCAAAGAATGGGGAAGGAGATGATGGGGTGGTTTTGTTCGAGCAAAT
GAAAAATGTGGGATTGCAGCCAAAT
Protein sequenceShow/hide protein sequence
YHIKPQLTNKVEADGLMIKGYAKNGEGDDGVVLFEQMKNVGLQPN