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MS014737 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014737
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold198:455996..456310
RNA-Seq ExpressionMS014737
SyntenyMS014737
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-1248.19Show/hide
Query:  PLLAKIKAIIEGLKLAISLQFSHLQVESDFLITVRLLNEEVFSMGDELSWLMEVKSLSLSFSSISFTHVGKGCN-TAHTLAKY
        PLLA+I+ I+EGLK A +  F+HL+VESD L+ ++L+  E+ + GDE +W+ME+++L+  F+ ISF+H  + CN  AH LAK+
Subjt:  PLLAKIKAIIEGLKLAISLQFSHLQVESDFLITVRLLNEEVFSMGDELSWLMEVKSLSLSFSSISFTHVGKGCN-TAHTLAKY
TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248745.5e-1348.19Show/hide
Query:  PLLAKIKAIIEGLKLAISLQFSHLQVESDFLITVRLLNEEVFSMGDELSWLMEVKSLSLSFSSISFTHVGKGCN-TAHTLAKY
        PLLA+I+ I+EGLK A +  F+HL+VESD L+ ++L+  E+ + GDE +W+ME+++L+  F+ ISF+H  + CN  AH LAK+
Subjt:  PLLAKIKAIIEGLKLAISLQFSHLQVESDFLITVRLLNEEVFSMGDELSWLMEVKSLSLSFSSISFTHVGKGCN-TAHTLAKY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGCTGCTTGCTAAAATCAAGGCCATCATCGAGGGTCTAAAATTGGCAATTTCTCTTCAATTTTCCCATCTGCAGGTTGAATCAGACTTCCTTATCACAGTTCGGCTCCT
TAATGAGGAAGTTTTTTCTATGGGTGACGAGCTAAGCTGGCTGATGGAAGTAAAATCTCTTTCCCTCTCTTTCTCTTCAATTTCTTTCACTCATGTCGGTAAGGGATGTA
ATACAGCCCATACTCTTGCCAAATATGTTTTGAATTACTCTAGATCTTTTTTTTTTTTGACATCATCAGTATCCTATGTGGTTACTAAACCTTGT
mRNA sequenceShow/hide mRNA sequence
CCGCTGCTTGCTAAAATCAAGGCCATCATCGAGGGTCTAAAATTGGCAATTTCTCTTCAATTTTCCCATCTGCAGGTTGAATCAGACTTCCTTATCACAGTTCGGCTCCT
TAATGAGGAAGTTTTTTCTATGGGTGACGAGCTAAGCTGGCTGATGGAAGTAAAATCTCTTTCCCTCTCTTTCTCTTCAATTTCTTTCACTCATGTCGGTAAGGGATGTA
ATACAGCCCATACTCTTGCCAAATATGTTTTGAATTACTCTAGATCTTTTTTTTTTTTGACATCATCAGTATCCTATGTGGTTACTAAACCTTGT
Protein sequenceShow/hide protein sequence
PLLAKIKAIIEGLKLAISLQFSHLQVESDFLITVRLLNEEVFSMGDELSWLMEVKSLSLSFSSISFTHVGKGCNTAHTLAKYVLNYSRSFFFLTSSVSYVVTKPC