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MS014788 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014788
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtodermal factor 1 like
Genome locationscaffold493:76552..77184
RNA-Seq ExpressionMS014788
SyntenyMS014788
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08167.1 uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa]6.7e-5177.18Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA
        M++  FL LLLLL FA +   A  ASAR PGFLFSR  GRCT+QFWSSR EAWPRMAPETATVAK+FGSRARERYGSEMTLMEAA  A +E FGR+VKEA
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA

Query:  TAALLNSYG-RREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDIC
        TAALLNSY  RR+FP SAWEVKTLLIKALVS+EAA LQSQRFA AN+ C
Subjt:  TAALLNSYG-RREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDIC

XP_004148954.1 uncharacterized protein LOC101220310 [Cucumis sativus]7.1e-5378.43Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARD---EAFGRLV
        M++ RFLNLLLLLCFA +  TA  ASARRPGFLFSR  GRCT+QFWSSR EAWPRMAPE+ATVAK+FGSRA ERYGSEMTLMEAAA A D   E FGR+V
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARD---EAFGRLV

Query:  KEATAALLNSYGRRE-FPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
        KEATAALLNSY RR  FP SAWEVKTL IKALVS+EAA LQSQRFA AN+ CN
Subjt:  KEATAALLNSYGRRE-FPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN

XP_008451248.2 PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo]1.9e-5076.51Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA
        M++  FL LLLLL FA +   A  ASAR PGFLFSR  GRCT+QFWSSR EAWPRMAPE+ATVAK+FGSRARERYGSEMTLMEAA  A +E FGR+VKEA
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA

Query:  TAALLNSYG-RREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDIC
        TAALLNSY  RR+FP SAWEVKTLLIKALVS+EAA LQSQRFA AN+ C
Subjt:  TAALLNSYG-RREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDIC

XP_022143602.1 uncharacterized protein LOC111013459 [Momordica charantia]3.6e-73100Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA
        METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA

Query:  TAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
        TAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
Subjt:  TAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN

XP_022953859.1 uncharacterized protein LOC111456270 [Cucurbita moschata]1.9e-5073.55Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATA------RDEAFG
        MET R L+ LLLL FA +     AA +RRPGFLFSR RGRCT +FWSSRREAWPRMAPE+ATVAK+FGSRA ERYGSEMTL+ AA  A       +EAFG
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATA------RDEAFG

Query:  RLVKEATAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
        R+VKEATAALLNSY RR+FP +AWEVKTLLIKALVS+EAAALQSQRFA AN+ CN
Subjt:  RLVKEATAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN

TrEMBL top hitse value%identityAlignment
A0A0A0K735 Uncharacterized protein3.5e-5378.43Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARD---EAFGRLV
        M++ RFLNLLLLLCFA +  TA  ASARRPGFLFSR  GRCT+QFWSSR EAWPRMAPE+ATVAK+FGSRA ERYGSEMTLMEAAA A D   E FGR+V
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARD---EAFGRLV

Query:  KEATAALLNSYGRRE-FPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
        KEATAALLNSY RR  FP SAWEVKTL IKALVS+EAA LQSQRFA AN+ CN
Subjt:  KEATAALLNSYGRRE-FPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN

A0A5A7UZL8 Uncharacterized protein9.4e-5176.51Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA
        M++  FL LLLLL FA +   A  ASAR PGFLFSR  GRCT+QFWSSR EAWPRMAPE+ATVAK+FGSRARERYGSEMTLMEAA  A +E FGR+VKEA
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA

Query:  TAALLNSYG-RREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDIC
        TAALLNSY  RR+FP SAWEVKTLLIKALVS+EAA LQSQRFA AN+ C
Subjt:  TAALLNSYG-RREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDIC

A0A5D3C871 Uncharacterized protein3.2e-5177.18Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA
        M++  FL LLLLL FA +   A  ASAR PGFLFSR  GRCT+QFWSSR EAWPRMAPETATVAK+FGSRARERYGSEMTLMEAA  A +E FGR+VKEA
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA

Query:  TAALLNSYG-RREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDIC
        TAALLNSY  RR+FP SAWEVKTLLIKALVS+EAA LQSQRFA AN+ C
Subjt:  TAALLNSYG-RREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDIC

A0A6J1CRA8 uncharacterized protein LOC1110134591.8e-73100Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA
        METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEA

Query:  TAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
        TAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
Subjt:  TAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN

A0A6J1GR22 uncharacterized protein LOC1114562709.4e-5173.55Show/hide
Query:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATA------RDEAFG
        MET R L+ LLLL FA +     AA +RRPGFLFSR RGRCT +FWSSRREAWPRMAPE+ATVAK+FGSRA ERYGSEMTL+ AA  A       +EAFG
Subjt:  METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATA------RDEAFG

Query:  RLVKEATAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
        R+VKEATAALLNSY RR+FP +AWEVKTLLIKALVS+EAAALQSQRFA AN+ CN
Subjt:  RLVKEATAALLNSYGRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein9.7e-0837.82Show/hide
Query:  CTSQFW--SSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEATAALLNSYGRREFPLSAWEVKTLLIKALV--SEEAAAL
        C+ Q W     R  W  + P+T  VA  FG  A   YG++MT+ E A   R EA+  L++EAT ALLNSY    FP ++  V T    AL+  SE    +
Subjt:  CTSQFW--SSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEATAALLNSYGRREFPLSAWEVKTLLIKALV--SEEAAAL

Query:  QSQRFAVAND------ICN
         + RF  AN       +CN
Subjt:  QSQRFAVAND------ICN

AT2G20515.1 unknown protein2.1e-3453.19Show/hide
Query:  LLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSR-ARERYGSEMTLMEAAATARDE--AFGRLVKEATAALLNSY
        LLCF   +     +SA RPGF+++R RGRCT Q+WSS+REAWPRM PE +TV K+FG   A+ER+ S++TL+E+ A   +E  A+G L+K+  AAL+NSY
Subjt:  LLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSR-ARERYGSEMTLMEAAATARDE--AFGRLVKEATAALLNSY

Query:  GRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN
         R+ F  + WEVKT+LI+A+VSE AA  Q++ FAVAN  C+
Subjt:  GRREFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACGCCTCGTTTCCTCAATCTTCTTCTCCTTCTCTGCTTCGCCGTTTCCGAATTAACCGCCACCGCAGCGTCGGCGCGGCGGCCTGGATTTCTCTTCTCGAGAGC
CAGAGGACGATGCACTTCACAGTTCTGGAGCAGCAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAAACGGCGACGGTGGCGAAGGTTTTCGGATCGAGAGCTCGCGAAC
GGTACGGCTCCGAGATGACGCTAATGGAGGCGGCGGCGACGGCGAGGGATGAGGCGTTCGGAAGGCTGGTGAAGGAGGCAACTGCAGCATTGTTGAATTCGTATGGGAGA
AGGGAGTTTCCATTGTCGGCTTGGGAGGTGAAGACATTGTTGATCAAAGCTTTGGTCTCGGAGGAGGCTGCGGCTCTTCAGTCTCAGCGTTTTGCTGTGGCCAATGACAT
CTGTAAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGACGCCTCGTTTCCTCAATCTTCTTCTCCTTCTCTGCTTCGCCGTTTCCGAATTAACCGCCACCGCAGCGTCGGCGCGGCGGCCTGGATTTCTCTTCTCGAGAGC
CAGAGGACGATGCACTTCACAGTTCTGGAGCAGCAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAAACGGCGACGGTGGCGAAGGTTTTCGGATCGAGAGCTCGCGAAC
GGTACGGCTCCGAGATGACGCTAATGGAGGCGGCGGCGACGGCGAGGGATGAGGCGTTCGGAAGGCTGGTGAAGGAGGCAACTGCAGCATTGTTGAATTCGTATGGGAGA
AGGGAGTTTCCATTGTCGGCTTGGGAGGTGAAGACATTGTTGATCAAAGCTTTGGTCTCGGAGGAGGCTGCGGCTCTTCAGTCTCAGCGTTTTGCTGTGGCCAATGACAT
CTGTAAT
Protein sequenceShow/hide protein sequence
METPRFLNLLLLLCFAVSELTATAASARRPGFLFSRARGRCTSQFWSSRREAWPRMAPETATVAKVFGSRARERYGSEMTLMEAAATARDEAFGRLVKEATAALLNSYGR
REFPLSAWEVKTLLIKALVSEEAAALQSQRFAVANDICN