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MS014792 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014792
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold493:128023..128286
RNA-Seq ExpressionMS014792
SyntenyMS014792
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]4.3e-0533.72Show/hide
Query:  PNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF
        P+ C  C +  K   ++F    +++  W  +F  FN+ W F    S S  QL+SG++L +  RI+   +   L  ++WIERN+RIF
Subjt:  PNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF
TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]4.3e-0533.72Show/hide
Query:  PNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF
        P+ C  C +  K   ++F    +++  W  +F  FN+ W F    S S  QL+SG++L +  RI+   +   L  ++WIERN+RIF
Subjt:  PNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF
XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]2.4e-0834.83Show/hide
Query:  LPPNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISG-THLREQARIVKITMWWWLCFKLWIERNKRIF
        L P++C  C +  +   ++FF  + A+ CW+ LF  FN+ WCF +++ D+  QL+ G  HL    R + + +   L  +LW ERN R+F
Subjt:  LPPNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISG-THLREQARIVKITMWWWLCFKLWIERNKRIF
TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein2.1e-0533.72Show/hide
Query:  PNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF
        P+ C  C +  K   ++F    +++  W  +F  FN+ W F    S S  QL+SG++L +  RI+   +   L  ++WIERN+RIF
Subjt:  PNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF
A0A5D3DE60 zf-RVT domain-containing protein2.1e-0533.72Show/hide
Query:  PNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF
        P+ C  C +  K   ++F    +++  W  +F  FN+ W F    S S  QL+SG++L +  RI+   +   L  ++WIERN+RIF
Subjt:  PNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF
A0A6J1DIE2 uncharacterized protein LOC1110207651.2e-0834.83Show/hide
Query:  LPPNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISG-THLREQARIVKITMWWWLCFKLWIERNKRIF
        L P++C  C +  +   ++FF  + A+ CW+ LF  FN+ WCF +++ D+  QL+ G  HL    R + + +   L  +LW ERN R+F
Subjt:  LPPNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISG-THLREQARIVKITMWWWLCFKLWIERNKRIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCCCCCCGAACTGGTGTCTGACGTGTAGAAGGAGAGAAAAGTGCACTAAGTATGTTTTCTTTCTCCACCACATCGCTGCTTCTTGTTGGTCTGAACTTTTTCAAGCCTT
TAATATTCGTTGGTGCTTCCCCATGCGAAGCTCTGATTCATTTAAACAGCTCATTTCTGGTACCCATTTAAGGGAACAAGCTAGAATTGTAAAAATTACAATGTGGTGGT
GGCTTTGCTTTAAATTGTGGATTGAAAGAAACAAAAGAATTTTT
mRNA sequenceShow/hide mRNA sequence
CTCCCCCCGAACTGGTGTCTGACGTGTAGAAGGAGAGAAAAGTGCACTAAGTATGTTTTCTTTCTCCACCACATCGCTGCTTCTTGTTGGTCTGAACTTTTTCAAGCCTT
TAATATTCGTTGGTGCTTCCCCATGCGAAGCTCTGATTCATTTAAACAGCTCATTTCTGGTACCCATTTAAGGGAACAAGCTAGAATTGTAAAAATTACAATGTGGTGGT
GGCTTTGCTTTAAATTGTGGATTGAAAGAAACAAAAGAATTTTT
Protein sequenceShow/hide protein sequence
LPPNWCLTCRRREKCTKYVFFLHHIAASCWSELFQAFNIRWCFPMRSSDSFKQLISGTHLREQARIVKITMWWWLCFKLWIERNKRIF