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MS014795 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014795
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S12, chloroplastic
Genome locationscaffold493:153387..153504
RNA-Seq ExpressionMS014795
SyntenyMS014795
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015867265.1 uncharacterized protein LOC107404780 [Ziziphus jujuba]3.8e-0677.5Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVTELV VTL++G+EEG+RFS EEND++TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
XP_022932068.1 uncharacterized protein LOC111438394 [Cucurbita moschata]3.1e-0887.5Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVTELVPVTLRDGMEEGRRFS EE D +TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
XP_024929966.1 uncharacterized protein LOC112488761 [Ziziphus jujuba]3.8e-0677.5Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVTELV VTL++G+EEG+RFS EEND++TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
XP_038896566.1 30S ribosomal protein S12, chloroplastic-like [Benincasa hispida]9.1e-0885Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVT+LVPVTLRDGMEEGRRFS EE D +TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
XP_038902483.1 30S ribosomal protein S12, chloroplastic-like [Benincasa hispida]4.5e-0785Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVTELV VTLRDGMEEGRRFS EE D +TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
TrEMBL top hitse value%identityAlignment
A0A443Q5I9 30S ribosomal protein S12, chloroplastic2.4e-0684.62Show/hide
Query:  NENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +ENVTELV VTLRDG+EEGRRFS EE D ITSKELNEEP
Subjt:  NENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
A0A6J1F0L1 uncharacterized protein LOC1114383941.5e-0887.5Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVTELVPVTLRDGMEEGRRFS EE D +TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
A0A6P3YU62 uncharacterized protein LOC1074047801.8e-0677.5Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVTELV VTL++G+EEG+RFS EEND++TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
A0A6P6G7D1 uncharacterized protein LOC1124887611.8e-0677.5Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVTELV VTL++G+EEG+RFS EEND++TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
A0A6P6GKJ1 uncharacterized protein LOC1124887681.8e-0677.5Show/hide
Query:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
        +NENVTELV VTL++G+EEG+RFS EEND++TSKELNEEP
Subjt:  LNENVTELVPVTLRDGMEEGRRFS-EENDQITSKELNEEP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAATGAAAACGTGACTGAATTAGTCCCAGTTACTCTTCGGGACGGAATGGAAGAAGGGAGGAGATTTTCAGAGGAAAATGATCAAATTACTTCGAAAGAATTGAACGA
GGAACCG
mRNA sequenceShow/hide mRNA sequence
TTGAATGAAAACGTGACTGAATTAGTCCCAGTTACTCTTCGGGACGGAATGGAAGAAGGGAGGAGATTTTCAGAGGAAAATGATCAAATTACTTCGAAAGAATTGAACGA
GGAACCG
Protein sequenceShow/hide protein sequence
LNENVTELVPVTLRDGMEEGRRFSEENDQITSKELNEEP