CuGenDBv2

Gene ID	MS014801
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome location	scaffold493:249713..249889
RNA-Seq Expression	MS014801
Synteny	MS014801
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H

Homology

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GenBank top hits

e value

%identity

Alignment

QDL00001.1 NdhA [Siraitia grosvenorii]

7.5e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYE FEINK YEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

QJS52316.1 NADH-plastoquinone oxidoreductase subunit 1 [Indofevillea khasiana]

7.5e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYE FEINK YEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

YP_009456202.1 NADH dehydrogenase subunit 1 [Lagenaria siceraria]

5.7e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYEFFEINK YEVFGMTISIFITLAKTYLFLFISI TRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

YP_009738258.1 NADH dehydrogenase subunit 1 [Siraitia siamensis]

7.5e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYE FEINK YEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

YP_009751534.1 NADH dehydrogenase subunit A [Thladiantha dubia]

7.5e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYE FEINK YEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

TrEMBL top hits

e value

%identity

Alignment

A0A2I6C0A5 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

2.8e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYEFFEINK YEVFGMTISIFITLAKTYLFLFISI TRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

A0A514YKY7 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

3.6e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYE FEINK YEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

A0A515BLM0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

3.6e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYE FEINK YEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

A0A6C0U9F1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

3.6e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYE FEINK YEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

A0A7G9IT93 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

2.8e-22

96.61

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IFGYEFFEINK YEVFGMTISIFITLAKTYLFLFISI TRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

SwissProt top hits

e value

%identity

Alignment

Q09WW3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

2.8e-19

81.36

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IF ++FFEINK Y VF  TI +FITLAKTYLFLFI ITTRWTLPRLR+DQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

Q0ZIW3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

5.6e-20

86.44

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IF  EFFEINK  EVFG TI IFITLAKTYLFLFI ITTRWTLPRLR+DQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

6.4e-24

94.92

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        I GYE FEINKVYEVFGMTISIFITLAKTYLFLFISI TRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

Q49KU3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

1.2e-19

86.44

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Query:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        IF  E FEINKV  VFG TI IFITLAKTY FLFISITTRWTLPRLRIDQLLNLGWKFL
Subjt:  IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

Q9BBN9 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

7.3e-20

85.71

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Query:  YEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        +EFFEINK Y VFG TI IFITLAKTYLFLF+SI TRWTLPRLR+DQLLNLGWKFL
Subjt:  YEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

Arabidopsis top hits

e value

%identity

Alignment

ATCG01100.1 NADH dehydrogenase family protein

1.3e-16

84.78

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Query:  EVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL
        ++FG TI IFITLAKTYLFLF+SI TRWTLPRLR+DQLLNLGWKFL
Subjt:  EVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

Sequences

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CDS sequence

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ATATTCGGTTATGAATTTTTTGAAATAAATAAAGTGTATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCTAAAACTTATTTGTTCTTGTTCATTTCTAT
AACAACAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTAAATCTCGGATGGAAATTTCTA

mRNA sequence

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ATATTCGGTTATGAATTTTTTGAAATAAATAAAGTGTATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCTAAAACTTATTTGTTCTTGTTCATTTCTAT
AACAACAAGATGGACTTTACCCCGACTAAGAATAGACCAACTATTAAATCTCGGATGGAAATTTCTA

Protein sequence

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IFGYEFFEINKVYEVFGMTISIFITLAKTYLFLFISITTRWTLPRLRIDQLLNLGWKFL

MS014801 (gene) of Bitter gourd (TR) v1 genome