CuGenDBv2

Gene ID	MS014809
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome location	scaffold493:401717..403264
RNA-Seq Expression	MS014809
Synteny	MS014809
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0070469 - respirasome (cellular component)
InterPro domains	IPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033972.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]

5.5e-60

87.31

Show/hide

Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NS+EG LRK+IST QV GPDL SFIRQ PTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

TYK02574.1 NDUFA12 domain-containing protein [Cucumis melo var. makuwa]

5.5e-60

87.31

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NS+EG LRK+IST QV GPDL SFIRQ PTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

XP_022155795.1 uncharacterized protein LOC111022834 isoform X1 [Momordica charantia]

7.2e-68

99.25

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NSREGNLRKVIS DQVAGPDLNSFIRQFPTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

XP_038903173.1 uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]

4.5e-62

89.55

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NS+EGNLRK+IST QVAGPDL SFIRQFPTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

XP_038903174.1 uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]

4.5e-62

89.55

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NS+EGNLRK+IST QVAGPDL SFIRQFPTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L526 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

4.5e-60

86.57

Show/hide

Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIA+FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWV+FKGEDDPTSIPVEWICWLNGQRKKAPTPEEM ELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NS+EGNLRK+IST QV GPDL SFIRQ PTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

A0A5A7SS01 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

2.7e-60

87.31

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NS+EG LRK+IST QV GPDL SFIRQ PTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

A0A5D3BTS9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

2.7e-60

87.31

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NS+EG LRK+IST QV GPDL SFIRQ PTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

A0A6J1DNE9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

3.5e-68

99.25

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        NSREGNLRKVIS DQVAGPDLNSFIRQFPTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

A0A6J1JVV8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

6.1e-57

85.07

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MSKLF KIA FF+ RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMER
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
         S+E NLRKV+ST  VAGP+L SFIRQFPTGSEG
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

SwissProt top hits

e value

%identity

Alignment

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

7.6e-04

38.98

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Query:  TMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT
        T+ GVDK GN+Y+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Subjt:  TMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT

Arabidopsis top hits

e value

%identity

Alignment

AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

2.2e-46

67.16

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Query:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER
        MS+L+ + A  FSS++  GVDK+GNKYF R EEIDG +KEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NV LLKK+E E+
Subjt:  MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMER

Query:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
         +R G  RK I+  +V GPDL SF+RQFP  S+G
Subjt:  NSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

AT4G26965.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit

1.6e-33

71.13

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Query:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG
        MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NV LLKK+E E+ +R G  RK I+  +V GPDL SF+RQFP  S+G
Subjt:  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKVISTDQVAGPDLNSFIRQFPTGSEG

Sequences

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CDS sequence

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ATGTCGAAGCTTTTCGGGAAAATTGCCAGCTTCTTCAGCAGTAGAACCATGGCGGGAGTGGACAAATCAGGAAACAAATACTTCTTCAGAAAAGAAGAAATCGATGGTTT
AATGAAAGAGAAGAGATGGGTGGTGTTTAAGGGTGAGGATGATCCAACGTCTATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAG
AGGAAATGATGGAGCTGGAAGCTAGGCGTGAACGTGTGCGACAAAATGTTACCCTTCTCAAGAAACAAGAGATGGAAAGAAACTCTAGAGAAGGCAATTTACGGAAAGTC
ATCAGCACTGATCAAGTTGCAGGTCCTGACTTGAACAGCTTTATTCGACAATTTCCAACTGGTTCAGAAGGTATCATA

mRNA sequence

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Protein sequence

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MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKV
ISTDQVAGPDLNSFIRQFPTGSEGII

MS014809 (gene) of Bitter gourd (TR) v1 genome