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MS014811 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014811
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase subunit beta'
Genome locationscaffold493:432338..432424
RNA-Seq ExpressionMS014811
SyntenyMS014811
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGG09522.1 RNA polymerase subunit C, partial [Ulva fasciata]2.7e-0486.21Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTF+IH LIRQH ASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
AHM88912.1 RNA polymerase beta [Lagenaria siceraria]3.5e-0489.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLI  LIRQHFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
QTX96628.1 RNA polymerase beta' subunit [Agrimonia pilosa var. nepalensis]3.5e-0489.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLI  LIRQHFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
YP_009437892.1 RNA polymerase beta [Tibetia liangshanensis]1.2e-0489.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLIH LIR+HFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
YP_010010770.1 RNA polymerase beta' subunit [Tibetia himalaica]1.2e-0489.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLIH LIR+HFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
TrEMBL top hitse value%identityAlignment
A0A218KG20 DNA-directed RNA polymerase subunit beta'1.7e-0489.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLI  LIRQHFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
A0A291FI53 DNA-directed RNA polymerase subunit beta'5.8e-0589.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLIH LIR+HFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
A0A6M3S6B8 DNA-directed RNA polymerase subunit beta'1.7e-0489.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLI  LIRQHFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
A0A7L8XQA5 DNA-directed RNA polymerase subunit beta'5.8e-0589.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLIH LIR+HFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
M1QWY5 DNA-directed RNA polymerase (Fragment)1.3e-0486.21Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTF+IH LIRQH ASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
SwissProt top hitse value%identityAlignment
A6MMJ8 DNA-directed RNA polymerase subunit beta'7.8e-0786.21Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLIH LI+QH ASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
Q09X26 DNA-directed RNA polymerase subunit beta'1.0e-0686.21Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTF+I  LIRQHFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
Q4VZP2 DNA-directed RNA polymerase subunit beta'4.5e-0789.66Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLI  LIRQHFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
Q8HVY4 DNA-directed RNA polymerase subunit beta'1.3e-0686.21Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLI  LIR+HFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
Q9BBS8 DNA-directed RNA polymerase subunit beta'7.8e-0786.21Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTFLI  LIR+HFASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI
Arabidopsis top hitse value%identityAlignment
ATCG00180.1 DNA-directed RNA polymerase family protein3.6e-0782.76Show/hide
Query:  CGLPREITIELFQTFLIHILIRQHFASNI
        CGLPREI IELFQTF+I  LIRQH ASNI
Subjt:  CGLPREITIELFQTFLIHILIRQHFASNI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTGGATTACCTCGCGAGATTACAATAGAGCTTTTCCAGACATTTTTAATTCATATTCTAATTCGACAACATTTTGCCTCGAACATA
mRNA sequenceShow/hide mRNA sequence
TGTGGATTACCTCGCGAGATTACAATAGAGCTTTTCCAGACATTTTTAATTCATATTCTAATTCGACAACATTTTGCCTCGAACATA
Protein sequenceShow/hide protein sequence
CGLPREITIELFQTFLIHILIRQHFASNI