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MS014816 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014816
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold493:486175..486300
RNA-Seq ExpressionMS014816
SyntenyMS014816
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EMS49590.1 U-box domain-containing protein 4 [Triticum urartu]5.0e-0456.76Show/hide
Query:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY
        LF N  R+++GNG+ T FW+D WLGD+ LAL +P LY
Subjt:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY

GEV24815.1 hypothetical protein [Tanacetum cinerariifolium]8.6e-0457.89Show/hide
Query:  FLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLYFL
        FL+  +  +GNG  T FWKD W+GDS L L+FPRLY L
Subjt:  FLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLYFL

GEV77460.1 RNA-directed DNA polymerase, eukaryota, reverse transcriptase zinc-binding domain protein [Tanacetum cinerariifolium]6.6e-0456.1Show/hide
Query:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLYFLSS
        + L+FLR  +GNG  T FW D W+GDSSL   FPR+Y L+S
Subjt:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLYFLSS

OVA07023.1 Reverse transcriptase zinc-binding domain [Macleaya cordata]8.6e-0456.76Show/hide
Query:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY
        +FL  L++ +GNG++T FW D WLGD +LA+ FPRLY
Subjt:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY

XP_027911678.1 uncharacterized protein LOC114170399 [Vigna unguiculata]5.0e-0451.28Show/hide
Query:  FLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLYFLS
        F NF+ WV+G G +  FW+D W+G+ SL   FPRLY +S
Subjt:  FLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLYFLS

TrEMBL top hitse value%identityAlignment
A0A200QJ46 Reverse transcriptase zinc-binding domain4.2e-0456.76Show/hide
Query:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY
        +FL  L++ +GNG++T FW D WLGD +LA+ FPRLY
Subjt:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY

A0A446NZ12 F-box domain-containing protein7.1e-0454.05Show/hide
Query:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY
        LF N  R+++GNG+ T FW+D WLG++ LAL +P LY
Subjt:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY

A0A452Z2S4 Uncharacterized protein1.4e-0454.05Show/hide
Query:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY
        +FLN+ ++++GNG+ T FW+D WLGD+ LAL +P LY
Subjt:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY

A0A453FC40 Uncharacterized protein3.2e-0456.76Show/hide
Query:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY
        +FLN  ++V+GNG+ T FW+D WLGD+ LAL +P LY
Subjt:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY

M7ZB29 U-box domain-containing protein 42.4e-0456.76Show/hide
Query:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY
        LF N  R+++GNG+ T FW+D WLGD+ LAL +P LY
Subjt:  LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATTTTTGAATTTCTTGAGATGGGTTATTGGAAATGGCTCCCAAACTTATTTTTGGAAGGATTGTTGGTTGGGAGATTCCTCTCTTGCCTTGCTTTTCCCTCGGTTGTA
CTTCTTGTCTTCTATG
mRNA sequenceShow/hide mRNA sequence
TTATTTTTGAATTTCTTGAGATGGGTTATTGGAAATGGCTCCCAAACTTATTTTTGGAAGGATTGTTGGTTGGGAGATTCCTCTCTTGCCTTGCTTTTCCCTCGGTTGTA
CTTCTTGTCTTCTATG
Protein sequenceShow/hide protein sequence
LFLNFLRWVIGNGSQTYFWKDCWLGDSSLALLFPRLYFLSSM