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MS014821 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014821
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold493:554391..554585
RNA-Seq ExpressionMS014821
SyntenyMS014821
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7832946.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]5.6e-1044.62Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        K +WKL IP KI  FLW+   G LP   NL K+G+D+ P CP C ++ E+  HA L C +++ +W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

RYR44318.1 hypothetical protein Ahy_A08g040672 [Arachis hypogaea]1.5e-1049.23Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        + IWKL +P KI TFLW+  H  LP   NL KK +   P CP C  + E+T HALLLCP  + +W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

RYR47522.1 hypothetical protein Ahy_A07g033454 [Arachis hypogaea]1.6e-0947.69Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        + IWKL +P KI TFLW+  H  LP   NL  K +   P CP C  + E+T HALLLCP  +  W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

RYR63043.1 hypothetical protein Ahy_A04g020830 [Arachis hypogaea]2.8e-0946.15Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        K IWKL +P K+  FLWK +H  LP   NL +K + + P C  C+ + ET  HALLLCP  + +W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

XP_025692479.1 uncharacterized protein LOC112794712 [Arachis hypogaea]2.8e-0946.15Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        K IWKL +P K+  FLWK +H  LP   NL +K + + P C  C+ + ET  HALLLCP  + +W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

TrEMBL top hitse value%identityAlignment
A0A445C0H0 RNase H domain-containing protein7.1e-1149.23Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        + IWKL +P KI TFLW+  H  LP   NL KK +   P CP C  + E+T HALLLCP  + +W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

A0A445C9A7 CCHC-type domain-containing protein7.8e-1047.69Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        + IWKL +P KI TFLW+  H  LP   NL  K +   P CP C  + E+T HALLLCP  +  W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

A0A445DIN7 Uncharacterized protein1.3e-0946.15Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        K IWKL +P K+  FLWK +H  LP   NL +K + + P C  C+ + ET  HALLLCP  + +W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

A0A6P4CZU6 uncharacterized protein LOC1074835701.3e-0946.15Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        K IWKL +P K+  FLWK +H  LP   NL +K + + P C  C+ + ET  HALLLCP  + +W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

A0A7J6G6P2 Peptidase A1 domain-containing protein1.7e-0945.16Show/hide
Query:  WKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        WKL +P+K+  F+WK  H  LP    L ++ +   PYCP CK + ET  HAL LC R K +W
Subjt:  WKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein7.2e-0836.92Show/hide
Query:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        + IWKL +  KI  FLW+ + G L T   LR + +D  P C  C  + ET  H +  CP  + +W
Subjt:  KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW

AT3G25270.1 Ribonuclease H-like superfamily protein2.6e-0536.51Show/hide
Query:  IWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW
        IWKL    KI  FLWK + G L T  NL+++ +   P C  C  + ET+ H    C   + +W
Subjt:  IWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGGTATTTGGAAACTTTGTATTCCTACAAAGATCATGACATTCCTATGGAAAACGATGCATGGATTCCTTCCTACCATGTATAATCTACGAAAGAAAGGTTTGGACAT
CTTACCCTATTGCCCATGTTGCAAAACGAAGGTTGAAACCACAGTTCATGCCCTTTTGCTCTGCCCTCGAGTGAAGCCGATATGG
mRNA sequenceShow/hide mRNA sequence
AAAGGTATTTGGAAACTTTGTATTCCTACAAAGATCATGACATTCCTATGGAAAACGATGCATGGATTCCTTCCTACCATGTATAATCTACGAAAGAAAGGTTTGGACAT
CTTACCCTATTGCCCATGTTGCAAAACGAAGGTTGAAACCACAGTTCATGCCCTTTTGCTCTGCCCTCGAGTGAAGCCGATATGG
Protein sequenceShow/hide protein sequence
KGIWKLCIPTKIMTFLWKTMHGFLPTMYNLRKKGLDILPYCPCCKTKVETTVHALLLCPRVKPIW