; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014822 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014822
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold493:564525..565096
RNA-Seq ExpressionMS014822
SyntenyMS014822
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451269.1 PREDICTED: auxin-induced protein 22D-like [Cucumis melo]3.8e-5586.82Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGF-NGSDYAPTYEDKDGDW
        +AQVVGWPP+RSYRKN LAGKK+E ES S  YVKVSMDGAPYLRK+DLTIYKSY ELVKALENMFKFNLG      YSEKEGF NGSDYAPTYEDKDGDW
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGF-NGSDYAPTYEDKDGDW

Query:  MLVGDVPWEMFISSCKRLRIMKGSEARGL
        MLVGDVPWEMFISSCKRLRIMKGSEARGL
Subjt:  MLVGDVPWEMFISSCKRLRIMKGSEARGL

XP_022155822.1 auxin-induced protein 22D-like [Momordica charantia]8.5e-6395.31Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +AQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLG     DYSEKEGFNGSDYAPTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMFISSCKRLRIMKGSEARGL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

XP_022991276.1 auxin-induced protein 22D-like [Cucurbita maxima]1.0e-5585.16Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +AQVVGWPP+RSYR+N LAGKKTE ESC   YVKVSMDGAPYLRK+DLTIYKSY ELVKALENMFKFNLG      YSEKEGFNGSDYA TYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMFISSCKR+RIMKG+EARGL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

XP_023004261.1 auxin-induced protein 22D-like [Cucurbita maxima]6.6e-5583.59Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        + Q+VGWPPIRSYRKN LAGKK+E ESC+  YVKVSMDGAPYLRK+DLTIYKSYVELVKALENMF FNLG      YSEKEGFNGSDY PTYEDKD DWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMFI SCKRLRIMKGSEA+GL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

XP_023513502.1 auxin-induced protein 22D-like [Cucurbita pepo subsp. pepo]6.6e-5582.81Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +AQ+VGWPP+RSYRKN LAGKK+E ESC+  YVKVSMDGAPYLRK+DLTIYKSYVELVKALENMF FNLG      YSEKEGFNGSDY PTYEDKD DWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMFI SCKRLRIMKGSEA+G+
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

TrEMBL top hitse value%identityAlignment
A0A1S3BS59 Auxin-responsive protein1.9e-5586.82Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGF-NGSDYAPTYEDKDGDW
        +AQVVGWPP+RSYRKN LAGKK+E ES S  YVKVSMDGAPYLRK+DLTIYKSY ELVKALENMFKFNLG      YSEKEGF NGSDYAPTYEDKDGDW
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGF-NGSDYAPTYEDKDGDW

Query:  MLVGDVPWEMFISSCKRLRIMKGSEARGL
        MLVGDVPWEMFISSCKRLRIMKGSEARGL
Subjt:  MLVGDVPWEMFISSCKRLRIMKGSEARGL

A0A5A7UYH3 Auxin-responsive protein1.9e-5586.82Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGF-NGSDYAPTYEDKDGDW
        +AQVVGWPP+RSYRKN LAGKK+E ES S  YVKVSMDGAPYLRK+DLTIYKSY ELVKALENMFKFNLG      YSEKEGF NGSDYAPTYEDKDGDW
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGF-NGSDYAPTYEDKDGDW

Query:  MLVGDVPWEMFISSCKRLRIMKGSEARGL
        MLVGDVPWEMFISSCKRLRIMKGSEARGL
Subjt:  MLVGDVPWEMFISSCKRLRIMKGSEARGL

A0A6J1DQE7 Auxin-responsive protein4.1e-6395.31Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +AQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLG     DYSEKEGFNGSDYAPTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMFISSCKRLRIMKGSEARGL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

A0A6J1JQA6 Auxin-responsive protein4.9e-5685.16Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +AQVVGWPP+RSYR+N LAGKKTE ESC   YVKVSMDGAPYLRK+DLTIYKSY ELVKALENMFKFNLG      YSEKEGFNGSDYA TYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMFISSCKR+RIMKG+EARGL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

A0A6J1KRM5 Auxin-responsive protein3.2e-5583.59Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        + Q+VGWPPIRSYRKN LAGKK+E ESC+  YVKVSMDGAPYLRK+DLTIYKSYVELVKALENMF FNLG      YSEKEGFNGSDY PTYEDKD DWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMFI SCKRLRIMKGSEA+GL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

SwissProt top hitse value%identityAlignment
O24542 Auxin-induced protein 22D9.5e-4973.44Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +AQVVGWPPIRSYRKN +  KK E    +  YVKVSM GAPYLRK+DL +YKSY EL+KALENMFK       F +YSE+EG+NGS+YAPTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPW MF+SSCKRLRIMKGSEA+GL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

O24543 Auxin-induced protein 22E5.2e-4769.53Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        + QVVGWPPIRS+RKN L  KK E    +  Y+KVSM GAPYLRK+DL +YKSY EL+KAL+N+FK       F +YSE+EG+NGS+YAPTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPW MF+SSCKRLRI+KGSEA+GL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

P32294 Auxin-induced protein 22B8.3e-4568.75Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +A++VGWPPIRSYRKN +     EGE     +VKVSMDGAPYLRK+DL +Y  Y EL+KALE MFK  +G     +YSE+EG+ GS+YAPTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPW+MF++SCKRLRIMKGSEARGL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

P33077 Auxin-responsive protein IAA47.3e-4971.09Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +AQ+VGWPP+RSYRKN +  KK+E E     YVKVSMDGAPYLRK+DLT+YK Y EL+K+LENMFKF++G     +Y E+EG+ GSD+ PTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMF+SSCKRLRIMKGSE +GL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

Q38822 Auxin-responsive protein IAA38.9e-4768.22Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRA-YVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDW
        +AQ+VGWPP+RSYRKN +  KK E E   +  YVKVSMDGAPYLRK+DL+ YK Y EL+KALE MFKF++G     +Y E++G+ GSD+ PTYEDKDGDW
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRA-YVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDW

Query:  MLVGDVPWEMFISSCKRLRIMKGSEARGL
        ML+GDVPWEMFI +CKRLRIMKGSEA+GL
Subjt:  MLVGDVPWEMFISSCKRLRIMKGSEARGL

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein6.3e-4868.22Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRA-YVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDW
        +AQ+VGWPP+RSYRKN +  KK E E   +  YVKVSMDGAPYLRK+DL+ YK Y EL+KALE MFKF++G     +Y E++G+ GSD+ PTYEDKDGDW
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRA-YVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDW

Query:  MLVGDVPWEMFISSCKRLRIMKGSEARGL
        ML+GDVPWEMFI +CKRLRIMKGSEA+GL
Subjt:  MLVGDVPWEMFISSCKRLRIMKGSEARGL

AT3G04730.1 indoleacetic acid-induced protein 165.7e-4155.41Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKK------TEG--------------ESCSR-AYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKF----NLGKRKFS
        +AQVVGWPP+RS+RKN+++G+K      TEG               +C+  AYVKVSMDGAPYLRK+DL +YK+Y +L  AL  MF      N G +   
Subjt:  RAQVVGWPPIRSYRKNILAGKK------TEG--------------ESCSR-AYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKF----NLGKRKFS

Query:  DYSEK----EGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSEARGL
        D+  +    +  NGSDY PTYEDKDGDWMLVGDVPWEMF+ SCKR+RIMKGSEA GL
Subjt:  DYSEK----EGFNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIMKGSEARGL

AT3G23030.1 indole-3-acetic acid inducible 21.2e-4164.06Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        + Q+VGWPP+RS RKN          + S +YVKVSMDGAPYLRK+DL  YK+Y EL+KALENMFK  +G     +Y E+EG+ GS + PTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPW+MF SSCKRLRIMKGS+A  L
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL

AT4G14560.1 indole-3-acetic acid inducible1.4e-4264.8Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        + Q+VGWPP+RS RKN          + + +YVKVSMDGAPYLRK+DL +YK+Y EL+KALENMFKF +G     +YSE+EG+ GS + PTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEA
        LVGDVPW+MF SSC++LRIMKGSEA
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEA

AT5G43700.1 AUX/IAA transcriptional regulator family protein5.2e-5071.09Show/hide
Query:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM
        +AQ+VGWPP+RSYRKN +  KK+E E     YVKVSMDGAPYLRK+DLT+YK Y EL+K+LENMFKF++G     +Y E+EG+ GSD+ PTYEDKDGDWM
Subjt:  RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWM

Query:  LVGDVPWEMFISSCKRLRIMKGSEARGL
        LVGDVPWEMF+SSCKRLRIMKGSE +GL
Subjt:  LVGDVPWEMFISSCKRLRIMKGSEARGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGCACAAGTTGTAGGATGGCCACCGATTCGATCATATCGAAAAAATATTTTGGCCGGAAAGAAAACCGAGGGAGAAAGTTGCTCCAGAGCGTATGTGAAAGTTAGCAT
GGATGGAGCTCCTTATCTAAGGAAGATGGATCTTACCATTTACAAAAGCTACGTAGAGCTCGTGAAGGCCTTGGAAAACATGTTCAAATTCAACCTCGGTAAGAGAAAAT
TCAGTGATTACTCAGAGAAGGAAGGTTTCAATGGATCGGATTACGCTCCTACTTACGAAGACAAAGATGGCGATTGGATGCTCGTGGGCGATGTTCCATGGGAAATGTTC
ATCTCCTCTTGCAAGAGGCTGAGGATCATGAAGGGATCAGAAGCAAGAGGATTG
mRNA sequenceShow/hide mRNA sequence
AGGGCACAAGTTGTAGGATGGCCACCGATTCGATCATATCGAAAAAATATTTTGGCCGGAAAGAAAACCGAGGGAGAAAGTTGCTCCAGAGCGTATGTGAAAGTTAGCAT
GGATGGAGCTCCTTATCTAAGGAAGATGGATCTTACCATTTACAAAAGCTACGTAGAGCTCGTGAAGGCCTTGGAAAACATGTTCAAATTCAACCTCGGTAAGAGAAAAT
TCAGTGATTACTCAGAGAAGGAAGGTTTCAATGGATCGGATTACGCTCCTACTTACGAAGACAAAGATGGCGATTGGATGCTCGTGGGCGATGTTCCATGGGAAATGTTC
ATCTCCTCTTGCAAGAGGCTGAGGATCATGAAGGGATCAGAAGCAAGAGGATTG
Protein sequenceShow/hide protein sequence
RAQVVGWPPIRSYRKNILAGKKTEGESCSRAYVKVSMDGAPYLRKMDLTIYKSYVELVKALENMFKFNLGKRKFSDYSEKEGFNGSDYAPTYEDKDGDWMLVGDVPWEMF
ISSCKRLRIMKGSEARGL