; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014843 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014843
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRRM domain-containing protein
Genome locationscaffold46:126541..135972
RNA-Seq ExpressionMS014843
SyntenyMS014843
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012677 - Nucleotide-binding alpha-beta plait domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465688.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo]1.6e-12564.62Show/hide
Query:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE-----------EEEEEVLLPLKKMKEWLAGRPRGFGEGKEY
        ++ NSTKF  PH  LSL+     +GF VFA K+ G+G   + QP+DSDI+FDEFFDE+E           ++E+E+LLPLK  +EW A RPRGFGEGK Y
Subjt:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE-----------EEEEEVLLPLKKMKEWLAGRPRGFGEGKEY

Query:  DTSIEDKLLQELEQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKG
        DTSIEDKLLQE+EQ R AQAANINKLKNQ SS+ NSS++V E+ A +I STG  VRI+NLPKKKNI+RDLVVAFK FPGIINI PAV+GNKKTRDPICKG
Subjt:  DTSIEDKLLQELEQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKG

Query:  FAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHS
        FAFVDCKSEGDA+              RVQKQIKCE++NR+TS+SA +SSVGST ++   I E EAEQ AD+D DL+ E  RT++E+ E++L  V+E HS
Subjt:  FAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHS

Query:  DDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAA
         D D+   ESRTE KI+SPS KE+ +I E E IL  G+EEIHRE+ PIK K KVSKKKQPKEKGEKK LTEIPGSAKRLR+KEKAVLTDVYSRYG KS A
Subjt:  DDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAA

Query:  LVSKEGN
        L+S+EG+
Subjt:  LVSKEGN

XP_022151341.1 uncharacterized protein LOC111019305 [Momordica charantia]2.1e-19795.15Show/hide
Query:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQ
        SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFD    EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQ
Subjt:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQ

Query:  SRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--
        SRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI  
Subjt:  SRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--

Query:  ------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESK
                    RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESK
Subjt:  ------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESK

Query:  IRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
        IRSPSRKELERIHEPEEILPNGREEIHREIPPIKGK+KVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
Subjt:  IRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

XP_022999318.1 uncharacterized protein LOC111493728 [Cucurbita maxima]3.6e-12566.58Show/hide
Query:  NPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL
        NPNSTKF S HF LSLVH P  + F VF+ KK G+G   +   +DSDIEFD    +E+ + +E+LLPL  M+EWLA RPRGFGEGKEYDTSIE+KLLQE+
Subjt:  NPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL

Query:  EQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA
        EQSR AQAANINKLK+Q  S  NSS++V + +A +I +TG  VR++NLPKK+NIHRDL++AFK FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEGDA
Subjt:  EQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA

Query:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT
        I              RVQKQIKCE++N++TS  A E SV ST H+   I E +AEQ AD+D DL+ EV RTRVED+E+NL  VSELHSDD+DN   ESRT
Subjt:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT

Query:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
        ESKI  PS KEL++IHE EEI P GREE+HRE PPI  K +VSKKKQPKEKGE KS   IPGSAKRLR+KEKAVLTDVYSRYG KS AL SKEGN
Subjt:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

XP_031741253.1 uncharacterized protein LOC101210443 [Cucumis sativus]1.6e-12566.58Show/hide
Query:  STKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE---EEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL
        STKF  PH  LSL+ A   +GF VFA K+ G+G   + +P+DSDI FDEFFDE E   ++E+++LLPLK  KEW A RPRGFGEGK YDTSIED LLQE+
Subjt:  STKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE---EEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL

Query:  EQSRAAQAANINKLKNQSSES-NSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA
        EQ R AQAANINKLK+QSS + NSS++V E+ A +I STG  VRI+NLP+KKNIHRDLVVAFK FPGIINI PAV+GNKKTRDP+CKGFAFVDCKSEGDA
Subjt:  EQSRAAQAANINKLKNQSSES-NSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA

Query:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT
        +              RVQKQIKCE++NR+TS+SA  SS+ ST H+   I E EAEQ  D+D DL+ E  RT+ ED+E++L  VSE HS +ED+   ESRT
Subjt:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT

Query:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
        E  I+SPS KE+ +I E EEILP GREEIHRE+ PIK K KVSKKKQPKEKGEKK LTEIPGSAKRLR+KEKAVLTDVYSRYG KS ALVS+EGN
Subjt:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

XP_038890170.1 uncharacterized protein LOC120079826 [Benincasa hispida]1.3e-13067.33Show/hide
Query:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE-----EEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIED
        ++PNSTKF  PHF  SLVH    +GF VFA K+ G+G   + + ++SDIEFD+FFDE+E     E+E+E+LLPLK  +EW   RPRGFGEGK YDTSIED
Subjt:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE-----EEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIED

Query:  KLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDC
        KLLQE+EQSR AQAANINKL NQS SE  SS++   V+ ++I STG  VRIVNLPKKKNIHRDL+VAFK FPGIINI PAV+GNKKTRDPICKGFAFVDC
Subjt:  KLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDC

Query:  KSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNE
        KSEGDA+              RVQKQIKCE++NR+T +S  +SSVGST H+   I E EAE+  D+D DL+ E +RTR+ED+E++L  VSELHSD ED+ 
Subjt:  KSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNE

Query:  DAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEG
          ESRTESKI+SPS++E+ +IHE EEIL   REE+ REI PIKGK KVSKKKQPKEKGEKKSL EIPGSAKRLR+KEKAVLTDVYSRYGNKS ALVSKEG
Subjt:  DAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEG

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0KQN3 Uncharacterized protein7.8e-12666.58Show/hide
Query:  STKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE---EEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL
        STKF  PH  LSL+ A   +GF VFA K+ G+G   + +P+DSDI FDEFFDE E   ++E+++LLPLK  KEW A RPRGFGEGK YDTSIED LLQE+
Subjt:  STKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE---EEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL

Query:  EQSRAAQAANINKLKNQSSES-NSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA
        EQ R AQAANINKLK+QSS + NSS++V E+ A +I STG  VRI+NLP+KKNIHRDLVVAFK FPGIINI PAV+GNKKTRDP+CKGFAFVDCKSEGDA
Subjt:  EQSRAAQAANINKLKNQSSES-NSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA

Query:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT
        +              RVQKQIKCE++NR+TS+SA  SS+ ST H+   I E EAEQ  D+D DL+ E  RT+ ED+E++L  VSE HS +ED+   ESRT
Subjt:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT

Query:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
        E  I+SPS KE+ +I E EEILP GREEIHRE+ PIK K KVSKKKQPKEKGEKK LTEIPGSAKRLR+KEKAVLTDVYSRYG KS ALVS+EGN
Subjt:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

A0A1S3CPG6 uncharacterized protein LOC1035033177.8e-12664.62Show/hide
Query:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE-----------EEEEEVLLPLKKMKEWLAGRPRGFGEGKEY
        ++ NSTKF  PH  LSL+     +GF VFA K+ G+G   + QP+DSDI+FDEFFDE+E           ++E+E+LLPLK  +EW A RPRGFGEGK Y
Subjt:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE-----------EEEEEVLLPLKKMKEWLAGRPRGFGEGKEY

Query:  DTSIEDKLLQELEQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKG
        DTSIEDKLLQE+EQ R AQAANINKLKNQ SS+ NSS++V E+ A +I STG  VRI+NLPKKKNI+RDLVVAFK FPGIINI PAV+GNKKTRDPICKG
Subjt:  DTSIEDKLLQELEQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKG

Query:  FAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHS
        FAFVDCKSEGDA+              RVQKQIKCE++NR+TS+SA +SSVGST ++   I E EAEQ AD+D DL+ E  RT++E+ E++L  V+E HS
Subjt:  FAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHS

Query:  DDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAA
         D D+   ESRTE KI+SPS KE+ +I E E IL  G+EEIHRE+ PIK K KVSKKKQPKEKGEKK LTEIPGSAKRLR+KEKAVLTDVYSRYG KS A
Subjt:  DDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAA

Query:  LVSKEGN
        L+S+EG+
Subjt:  LVSKEGN

A0A6J1DEC7 uncharacterized protein LOC1110193059.9e-19895.15Show/hide
Query:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQ
        SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFD    EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQ
Subjt:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQ

Query:  SRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--
        SRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI  
Subjt:  SRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--

Query:  ------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESK
                    RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESK
Subjt:  ------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESK

Query:  IRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
        IRSPSRKELERIHEPEEILPNGREEIHREIPPIKGK+KVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
Subjt:  IRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

A0A6J1G3T4 uncharacterized protein LOC1114505241.2e-12366.07Show/hide
Query:  NPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQS
        NPNSTKF S HF LSLVH P  + F V A KK G+G    TD     +EF  +E+ + +E+LLPL  M+EWLA RPRGFGEGKEYDTSIE+KLLQE+EQS
Subjt:  NPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQS

Query:  RAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--
        R AQAANINKLK+Q  S  NS ++V + +A +I +TG  VRI+NLPKK+NIHRDL++AF+ FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEGDAI  
Subjt:  RAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--

Query:  ------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESK
                    RVQKQIKCE++N++TS SA E SV ST  +   I E EAEQ AD+D DL+ EV RTRVED+E+NL  VSEL SDDED+   ESRTESK
Subjt:  ------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESK

Query:  IRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
        I   S KEL++IHE EE+ P GREE+HRE PPI  K KVSKKKQPKEKGEKKS   IPGSAKRLR+KEKAVLTDVYSRYG KS AL SKEGN
Subjt:  IRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

A0A6J1KJD4 uncharacterized protein LOC1114937281.7e-12566.58Show/hide
Query:  NPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL
        NPNSTKF S HF LSLVH P  + F VF+ KK G+G   +   +DSDIEFD    +E+ + +E+LLPL  M+EWLA RPRGFGEGKEYDTSIE+KLLQE+
Subjt:  NPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL

Query:  EQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA
        EQSR AQAANINKLK+Q  S  NSS++V + +A +I +TG  VR++NLPKK+NIHRDL++AFK FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEGDA
Subjt:  EQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA

Query:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT
        I              RVQKQIKCE++N++TS  A E SV ST H+   I E +AEQ AD+D DL+ EV RTRVED+E+NL  VSELHSDD+DN   ESRT
Subjt:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT

Query:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
        ESKI  PS KEL++IHE EEI P GREE+HRE PPI  K +VSKKKQPKEKGE KS   IPGSAKRLR+KEKAVLTDVYSRYG KS AL SKEGN
Subjt:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G70200.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.2e-4735.59Show/hide
Query:  GFHVFAQKKPGRG---VAQPTDSDIEFDE---FFD-----EEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLK
        GF  FA  K   G   + +  D D E DE    FD     EEEEE+E   LP+ KMK+WL  +PRGFG GK+Y+T IEDKLL E+EQS  AQAAN+NKLK
Subjt:  GFHVFAQKKPGRG---VAQPTDSDIEFDE---FFD-----EEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLK

Query:  NQSSESNSSKSVAE-VKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR-------------
        N   +S   K     +K +     GF VR+ NLPKKKN+HRDL VAFKE  G+++I PAV GNKKT+DP+CKGFA VD K+E DA R             
Subjt:  NQSSESNSSKSVAE-VKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR-------------

Query:  -VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLD--------------KDLSDEVIRTRVEDMEENLVSVS-----------------
         V KQIKC+++   +  S  +         +  +P    E D+  D               D  +EV    VED E N +S S                 
Subjt:  -VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLD--------------KDLSDEVIRTRVEDMEENLVSVS-----------------

Query:  ---------------------------------ELHSDDEDNEDAESRT----------------------ESKIRSPSRKELERIHEPEEILPNGREEI
                                         E H DDE +E+A + T                       S + S     ++RI   E+ L  G+E++
Subjt:  ---------------------------------ELHSDDEDNEDAESRT----------------------ESKIRSPSRKELERIHEPEEILPNGREEI

Query:  --------HREIPP--IKGKMKVSKKKQP---KEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAA
                  E  P  ++GK K  KKK     K + +K +  EIPGS+KRL+VKEKA+LT V  +Y  K A+
Subjt:  --------HREIPP--IKGKMKVSKKKQP---KEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCAATCCCAATTCAACAAAATTCCTCTCACCCCACTTCTGTTTATCGCTTGTTCATGCCCCTCCGCGAATCGGGTTCCATGTTTTTGCACAGAAGAAGCCAGGGAGAGG
CGTCGCTCAACCCACTGACTCCGACATTGAGTTTGATGAATTCTTCGATGAGGAGGAGGAGGAGGAGGAGGAGGTGCTCCTGCCGTTGAAGAAGATGAAGGAGTGGCTTG
CGGGACGGCCTCGTGGGTTCGGAGAAGGGAAGGAGTACGATACCTCCATTGAAGACAAATTGCTGCAAGAATTGGAGCAGAGTAGGGCAGCTCAGGCTGCTAATATCAAT
AAGCTCAAGAACCAGTCTTCCGAGTCCAATTCTAGTAAGAGTGTTGCAGAGGTAAAAGCTTCAGATATTGGTAGTACTGGATTTGGTGTCCGCATTGTCAACCTTCCTAA
AAAGAAGAACATCCACAGAGATCTGGTGGTGGCTTTTAAAGAGTTTCCTGGAATAATCAATATAGTTCCTGCAGTCGTTGGAAACAAGAAGACTAGGGATCCAATCTGCA
AGGGTTTTGCATTTGTTGATTGCAAGTCCGAAGGAGACGCCATAAGAGTACAGAAGCAAATAAAATGTGAGATGATCAATCGACGGACTTCCACTTCTGCTTGTGAAAGC
TCGGTGGGCAGTACCAAGCATGCTCTACCAATTATTCCTGAATATGAAGCAGAGCAGGATGCTGACTTGGACAAGGATTTATCTGATGAAGTTATAAGAACAAGGGTGGA
GGATATGGAAGAAAATCTGGTATCTGTCAGTGAATTACATTCGGATGATGAGGATAATGAGGATGCAGAATCAAGAACAGAGTCCAAAATTCGGTCACCGTCCCGAAAGG
AACTAGAGAGAATCCATGAACCAGAAGAAATTCTTCCTAATGGAAGAGAGGAAATTCATAGGGAAATTCCACCTATTAAAGGGAAAATGAAGGTTTCAAAGAAAAAGCAA
CCCAAGGAAAAAGGAGAGAAGAAATCATTGACAGAAATTCCAGGATCTGCAAAAAGGTTAAGAGTAAAGGAGAAGGCCGTGTTAACTGACGTGTACTCAAGATATGGAAA
TAAATCAGCAGCTTTGGTTTCAAAAGAAGGGAAC
mRNA sequenceShow/hide mRNA sequence
TCCAATCCCAATTCAACAAAATTCCTCTCACCCCACTTCTGTTTATCGCTTGTTCATGCCCCTCCGCGAATCGGGTTCCATGTTTTTGCACAGAAGAAGCCAGGGAGAGG
CGTCGCTCAACCCACTGACTCCGACATTGAGTTTGATGAATTCTTCGATGAGGAGGAGGAGGAGGAGGAGGAGGTGCTCCTGCCGTTGAAGAAGATGAAGGAGTGGCTTG
CGGGACGGCCTCGTGGGTTCGGAGAAGGGAAGGAGTACGATACCTCCATTGAAGACAAATTGCTGCAAGAATTGGAGCAGAGTAGGGCAGCTCAGGCTGCTAATATCAAT
AAGCTCAAGAACCAGTCTTCCGAGTCCAATTCTAGTAAGAGTGTTGCAGAGGTAAAAGCTTCAGATATTGGTAGTACTGGATTTGGTGTCCGCATTGTCAACCTTCCTAA
AAAGAAGAACATCCACAGAGATCTGGTGGTGGCTTTTAAAGAGTTTCCTGGAATAATCAATATAGTTCCTGCAGTCGTTGGAAACAAGAAGACTAGGGATCCAATCTGCA
AGGGTTTTGCATTTGTTGATTGCAAGTCCGAAGGAGACGCCATAAGAGTACAGAAGCAAATAAAATGTGAGATGATCAATCGACGGACTTCCACTTCTGCTTGTGAAAGC
TCGGTGGGCAGTACCAAGCATGCTCTACCAATTATTCCTGAATATGAAGCAGAGCAGGATGCTGACTTGGACAAGGATTTATCTGATGAAGTTATAAGAACAAGGGTGGA
GGATATGGAAGAAAATCTGGTATCTGTCAGTGAATTACATTCGGATGATGAGGATAATGAGGATGCAGAATCAAGAACAGAGTCCAAAATTCGGTCACCGTCCCGAAAGG
AACTAGAGAGAATCCATGAACCAGAAGAAATTCTTCCTAATGGAAGAGAGGAAATTCATAGGGAAATTCCACCTATTAAAGGGAAAATGAAGGTTTCAAAGAAAAAGCAA
CCCAAGGAAAAAGGAGAGAAGAAATCATTGACAGAAATTCCAGGATCTGCAAAAAGGTTAAGAGTAAAGGAGAAGGCCGTGTTAACTGACGTGTACTCAAGATATGGAAA
TAAATCAGCAGCTTTGGTTTCAAAAGAAGGGAAC
Protein sequenceShow/hide protein sequence
SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANIN
KLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIRVQKQIKCEMINRRTSTSACES
SVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKMKVSKKKQ
PKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN