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MS014847 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014847
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationscaffold46:219753..219980
RNA-Seq ExpressionMS014847
SyntenyMS014847
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046765.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.3e-1362.67Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS
        L ++ELIGSLMT EI +  + E + KK KSIALKTISL+V  ED+D LD+ DI YLS KYKN IKRKK FK++ S
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS

TYK29684.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]2.8e-1361.33Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS
        L ++ELIGSLMT EI +  + E + KK KSIALKTISL+V  ED+D LD+ DI YLS KYKN IK+KK FK++ S
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS

XP_022931810.1 uncharacterized protein LOC111438099 [Cucurbita moschata]2.2e-1359.21Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFSN
        L +DEL+GSLMT EI +  + E + KK KSIALK  S+KV  ED+D LDE D+ Y + KYKN IKRKKQFK++F+N
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFSN

XP_031739764.1 uncharacterized protein LOC116403291 [Cucumis sativus]1.3e-1365.28Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKE
        L ++ELIGSLMT EI +K + E + KK KSIALKTISL+V  ED+D LDE DI Y S KYKN IKRKK F+E
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKE

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]2.0e-1464Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS
        L ++ELIGSLMT EI +K + E + KK KSIALKTISL+V  ED+D LDE DI Y S KYKN IKRKK FK++ S
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.8e-1362.67Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS
        L ++ELIGSLMT EI ++ + E + KK KSIAL TISL+  LED+D LDE DI+Y S KYKN IKRKK FK+Y S
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS

A0A5A7TZF4 Zf-CCHC domain-containing protein/UBN2 domain-containing protein6.1e-1462.67Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS
        L ++ELIGSLMT EI +  + E + KK KSIALKTISL+V  ED+D LD+ DI YLS KYKN IKRKK FK++ S
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein3.0e-1359.21Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFSN
        L  +ELIGSLMT EI +K + E + KK+KS+ALKTI L+V  +D+D LDE DI Y S KYKN IKRKK FK++ S+
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFSN

A0A5D3E1G2 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.4e-1361.33Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS
        L ++ELIGSLMT EI +  + E + KK KSIALKTISL+V  ED+D LD+ DI YLS KYKN IK+KK FK++ S
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFS

A0A6J1F0H1 uncharacterized protein LOC1114380991.0e-1359.21Show/hide
Query:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFSN
        L +DEL+GSLMT EI +  + E + KK KSIALK  S+KV  ED+D LDE D+ Y + KYKN IKRKKQFK++F+N
Subjt:  LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTATCCATGGATGAACTCATTGGATCGTTGATGACACGTGAGATAAAGATCAAAAGAAACAACGAGCATGACAAGAAAAAGGACAAGAGTATAGCCTTGAAGACCATTTC
CTTGAAAGTTATACTCGAAGATCAGGATGCTCTTGATGAAGGTGATATTATCTACCTCTCACATAAGTATAAGAACATTATCAAGCGGAAGAAACAATTCAAGGAATATT
TCTCTAAC
mRNA sequenceShow/hide mRNA sequence
CTATCCATGGATGAACTCATTGGATCGTTGATGACACGTGAGATAAAGATCAAAAGAAACAACGAGCATGACAAGAAAAAGGACAAGAGTATAGCCTTGAAGACCATTTC
CTTGAAAGTTATACTCGAAGATCAGGATGCTCTTGATGAAGGTGATATTATCTACCTCTCACATAAGTATAAGAACATTATCAAGCGGAAGAAACAATTCAAGGAATATT
TCTCTAAC
Protein sequenceShow/hide protein sequence
LSMDELIGSLMTREIKIKRNNEHDKKKDKSIALKTISLKVILEDQDALDEGDIIYLSHKYKNIIKRKKQFKEYFSN