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MS014848 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014848
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSecretion protein HlyD family protein
Genome locationscaffold46:248521..248721
RNA-Seq ExpressionMS014848
SyntenyMS014848
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033890.1 Secretion protein HlyD family protein [Cucumis melo var. makuwa]2.5e-0543.28Show/hide
Query:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        ++Q S A+ +A+++ KT E++ +QN  +EC V+WS+ + S EHPG  +SFL   FKA C+  N+ DD
Subjt:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

TYK01274.1 Secretion protein HlyD family protein [Cucumis melo var. makuwa]2.5e-0543.28Show/hide
Query:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        ++Q S A+ +A+++ KT E++ +QN  +EC V+WS+ + S EHPG  +SFL   FKA C+  N+ DD
Subjt:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

XP_008457530.1 PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo]2.5e-0543.28Show/hide
Query:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        ++Q S A+ +A+++ KT E++ +QN  +EC V+WS+ + S EHPG  +SFL   FKA C+  N+ DD
Subjt:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

XP_016902110.1 PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo]2.5e-0543.28Show/hide
Query:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        ++Q S A+ +A+++ KT E++ +QN  +EC V+WS+ + S EHPG  +SFL   FKA C+  N+ DD
Subjt:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

XP_022156747.1 uncharacterized protein LOC111023586 [Momordica charantia]4.9e-0952.46Show/hide
Query:  AEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        +EF+A+E+KKT EY++LQN+ +EC V W L ++S +HP    SFL E F+AE +  NDMDD
Subjt:  AEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

TrEMBL top hitse value%identityAlignment
A0A1S3C5B2 uncharacterized protein LOC103497199 isoform X11.2e-0543.28Show/hide
Query:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        ++Q S A+ +A+++ KT E++ +QN  +EC V+WS+ + S EHPG  +SFL   FKA C+  N+ DD
Subjt:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

A0A1S4E2A9 uncharacterized protein LOC103497199 isoform X31.2e-0543.28Show/hide
Query:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        ++Q S A+ +A+++ KT E++ +QN  +EC V+WS+ + S EHPG  +SFL   FKA C+  N+ DD
Subjt:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

A0A5A7SSF9 Secretion protein HlyD family protein1.2e-0543.28Show/hide
Query:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        ++Q S A+ +A+++ KT E++ +QN  +EC V+WS+ + S EHPG  +SFL   FKA C+  N+ DD
Subjt:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

A0A5D3BQ22 Secretion protein HlyD family protein1.2e-0543.28Show/hide
Query:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        ++Q S A+ +A+++ KT E++ +QN  +EC V+WS+ + S EHPG  +SFL   FKA C+  N+ DD
Subjt:  EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

A0A6J1DSS1 uncharacterized protein LOC1110235862.3e-0952.46Show/hide
Query:  AEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD
        +EF+A+E+KKT EY++LQN+ +EC V W L ++S +HP    SFL E F+AE +  NDMDD
Subjt:  AEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGCTCAACACTCCACCGCTGAATTTATGGCAAAGGAGTACAAGAAAACTGTGGAGTATATTAATTTGCAAAATGCCACTATAGAGTGCGATGTTTCTTGGTCGCTTTT
TAAACTTTCCAATGAACATCCTGGGAAATATTATTCTTTCCTCCATGAGTGTTTTAAGGCTGAATGCAACGTTGCTAATGACATGGATGAT
mRNA sequenceShow/hide mRNA sequence
GAGGCTCAACACTCCACCGCTGAATTTATGGCAAAGGAGTACAAGAAAACTGTGGAGTATATTAATTTGCAAAATGCCACTATAGAGTGCGATGTTTCTTGGTCGCTTTT
TAAACTTTCCAATGAACATCCTGGGAAATATTATTCTTTCCTCCATGAGTGTTTTAAGGCTGAATGCAACGTTGCTAATGACATGGATGAT
Protein sequenceShow/hide protein sequence
EAQHSTAEFMAKEYKKTVEYINLQNATIECDVSWSLFKLSNEHPGKYYSFLHECFKAECNVANDMDD