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MS014850 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014850
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSRP54 domain-containing protein
Genome locationscaffold46:259424..259534
RNA-Seq ExpressionMS014850
SyntenyMS014850
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0070208 - protein heterotrimerization (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0721854.1 hypothetical protein [Gossypium laxum]1.6e-0983.78Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT+T+RR+MRGVVRAEMFGQLTSGLE+A
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
MBA0809456.1 hypothetical protein [Gossypium harknessii]1.6e-0983.78Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT+T+RR+MRGVVRAEMFGQLTSGLE+A
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
TYH21989.1 hypothetical protein ES288_A04G090300v1 [Gossypium darwinii]1.6e-0983.78Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT+T+RR+MRGVVRAEMFGQLTSGLE+A
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
TYJ39697.1 hypothetical protein E1A91_A04G087000v1 [Gossypium mustelinum]1.6e-0983.78Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT+T+RR+MRGVVRAEMFGQLTSGLE+A
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
XP_022132862.1 signal recognition particle 54 kDa protein, chloroplastic [Momordica charantia]1.9e-1091.89Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT TTRRDMRGVVRAEMFGQLTSGLESA
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
TrEMBL top hitse value%identityAlignment
A0A0B0PNW4 Signal recognition particle 54 kDa protein, chloroplastic7.6e-1083.78Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT+T+RR+MRGVVRAEMFGQLTSGLE+A
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
A0A0D2TZI4 SRP54 domain-containing protein7.6e-1083.78Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT+T+RR+MRGVVRAEMFGQLTSGLE+A
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
A0A5D2LCE9 SRP54 domain-containing protein7.6e-1083.78Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT+T+RR+MRGVVRAEMFGQLTSGLE+A
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
A0A6J1BV08 signal recognition particle 54 kDa protein, chloroplastic9.0e-1191.89Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT TTRRDMRGVVRAEMFGQLTSGLESA
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
A0A6P4MPJ5 signal recognition particle 54 kDa protein, chloroplastic7.6e-1083.78Show/hide
Query:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
        R+IWGW+NSKT+T+RR+MRGVVRAEMFGQLTSGLE+A
Subjt:  RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA
SwissProt top hitse value%identityAlignment
P37107 Signal recognition particle 54 kDa protein, chloroplastic1.2e-0460.53Show/hide
Query:  RQIWGWINSKTSTTR-RDMRGVVRAEMFGQLTSGLESA
        R+IW W+ SKT     R  R  VRAEMFGQLT GLE+A
Subjt:  RQIWGWINSKTSTTR-RDMRGVVRAEMFGQLTSGLESA
Arabidopsis top hitse value%identityAlignment
AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit8.6e-0660.53Show/hide
Query:  RQIWGWINSKTSTTR-RDMRGVVRAEMFGQLTSGLESA
        R+IW W+ SKT     R  R  VRAEMFGQLT GLE+A
Subjt:  RQIWGWINSKTSTTR-RDMRGVVRAEMFGQLTSGLESA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGACAGATTTGGGGTTGGATTAATTCCAAGACTTCTACCACTAGGAGAGATATGCGTGGAGTTGTAAGAGCTGAAATGTTTGGTCAGTTGACAAGTGGCCTGGAGAGTGC
T
mRNA sequenceShow/hide mRNA sequence
AGACAGATTTGGGGTTGGATTAATTCCAAGACTTCTACCACTAGGAGAGATATGCGTGGAGTTGTAAGAGCTGAAATGTTTGGTCAGTTGACAAGTGGCCTGGAGAGTGC
T
Protein sequenceShow/hide protein sequence
RQIWGWINSKTSTTRRDMRGVVRAEMFGQLTSGLESA