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MS014871 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014871
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold977:44388..44504
RNA-Seq ExpressionMS014871
SyntenyMS014871
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2688924.1 hypothetical protein I3760_09G115800 [Carya illinoinensis]2.2e-0653.85Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        AIPTYTMSC QLP  FC+++  ++A+FWWG   ++R++H
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
MCH94768.1 reverse transcriptase-like protein [Trifolium medium]1.3e-0666.67Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        AIP Y MSC +LP S CQEI  + AKFWWGS + KRKIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
PNX80752.1 ribonuclease H, partial [Trifolium pratense]1.3e-0666.67Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        AIP Y MSC +LP S CQEI  + AKFWWGS + KRKIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
XP_021823769.1 uncharacterized protein LOC110765025 [Prunus avium]2.2e-0658.97Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        ++PTYTM+C  LP  FC E+N + AKFWW   K KRKIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]1.0e-0658.97Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        AIP Y+MSC + P + C+EIN LYA+FWWGS+ +++KIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
TrEMBL top hitse value%identityAlignment
A0A2N9HDH5 Uncharacterized protein1.3e-0761.54Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        AIPTYTM+C +LP ++C E+N L A++WWG +K KRKIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
A0A2N9HJA4 zf-RVT domain-containing protein1.3e-0761.54Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        AIPTYTM+C +LP ++C E+N L A++WWG +K KRKIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
A0A2N9HWG1 Reverse transcriptase domain-containing protein1.3e-0761.54Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        AIPTYTM+C +LP ++C E+N L A++WWG +K KRKIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
A0A2N9IM41 Reverse transcriptase domain-containing protein1.3e-0764.1Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        AIPTYTM+C +LP S+C E+N L A++WWG S  KRKIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
A0A2N9J4E8 Reverse transcriptase domain-containing protein1.3e-0761.54Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        +IPTYTM+C +LP ++C E+N L AK+WWG SK +RKIH
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein9.1e-0641.03Show/hide
Query:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH
        A+PTYTM+C  LP + C++I  + A FWW + ++ + +H
Subjt:  AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTATTCCAACTTATACAATGAGTTGCCTTCAACTCCCTAACAGCTTTTGCCAGGAAATCAACAAGTTATATGCAAAGTTTTGGTGGGGCTCATCTAAAAAGAAAAGGAA
GATCCAC
mRNA sequenceShow/hide mRNA sequence
GCTATTCCAACTTATACAATGAGTTGCCTTCAACTCCCTAACAGCTTTTGCCAGGAAATCAACAAGTTATATGCAAAGTTTTGGTGGGGCTCATCTAAAAAGAAAAGGAA
GATCCAC
Protein sequenceShow/hide protein sequence
AIPTYTMSCLQLPNSFCQEINKLYAKFWWGSSKKKRKIH