CuGenDBv2

Gene ID	MS014875
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor E2FA-like isoform X1
Genome location	scaffold977:89393..89572
RNA-Seq Expression	MS014875
Synteny	MS014875
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0007049 - cell cycle (biological process) GO:0005634 - nucleus (cellular component) GO:0005667 - transcription factor complex (cellular component) GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_016902872.1 PREDICTED: transcription factor E2FA-like isoform X1 [Cucumis melo]

3.1e-15

75.41

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI
        K KQKG MY+N+++SND I+D+GSSKDALS +QTPVSAKGGR Y KSK SR+TTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI

XP_022133333.1 transcription factor E2FA-like isoform X1 [Momordica charantia]

2.0e-22

96.67

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI
        KLKQKGAMYHNM ESNDCI DQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI

XP_022133334.1 transcription factor E2FA-like isoform X2 [Momordica charantia]

2.0e-22

96.67

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI
        KLKQKGAMYHNM ESNDCI DQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI

XP_038883299.1 transcription factor E2FA isoform X1 [Benincasa hispida]

2.2e-16

80.33

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI
        K KQKGAMY+NM+E ND I+DQGSSKDALSS+QTP+S KGGRVY KSK SR+TTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI

XP_038883300.1 transcription factor E2FA isoform X2 [Benincasa hispida]

2.2e-16

80.33

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI
        K KQKGAMY+NM+E ND I+DQGSSKDALSS+QTP+S KGGRVY KSK SR+TTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E3R8 transcription factor E2FA-like isoform X2

1.5e-15

75.41

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI
        K KQKG MY+N+++SND I+D+GSSKDALS +QTPVSAKGGR Y KSK SR+TTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI

A0A5A7SHW6 Transcription factor E2FA-like isoform X1

1.5e-15

75.41

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI
        K KQKG MY+N+++SND I+D+GSSKDALS +QTPVSAKGGR Y KSK SR+TTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI

A0A5D3C827 Transcription factor E2FA-like isoform X1

1.5e-15

75.41

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI
        K KQKG MY+N+++SND I+D+GSSKDALS +QTPVSAKGGR Y KSK SR+TTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVY-KSKASRRTTSGPQTPI

A0A6J1BVQ4 transcription factor E2FA-like isoform X2

9.7e-23

96.67

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI
        KLKQKGAMYHNM ESNDCI DQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI

A0A6J1BYV4 transcription factor E2FA-like isoform X1

9.7e-23

96.67

Show/hide

Query:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI
        KLKQKGAMYHNM ESNDCI DQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI
Subjt:  KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

AAACTAAAGCAGAAGGGTGCTATGTATCACAATATGATTGAATCTAATGACTGCATTAATGATCAGGGATCTTCCAAAGATGCTCTAAGTTCTATACAGACACCTGTGTC
TGCAAAAGGAGGAAGGGTGTACAAGTCAAAGGCTTCAAGGAGAACTACATCTGGGCCTCAAACACCAATC

mRNA sequence

Show/hide mRNA sequence

AAACTAAAGCAGAAGGGTGCTATGTATCACAATATGATTGAATCTAATGACTGCATTAATGATCAGGGATCTTCCAAAGATGCTCTAAGTTCTATACAGACACCTGTGTC
TGCAAAAGGAGGAAGGGTGTACAAGTCAAAGGCTTCAAGGAGAACTACATCTGGGCCTCAAACACCAATC

Protein sequence

Show/hide protein sequence

KLKQKGAMYHNMIESNDCINDQGSSKDALSSIQTPVSAKGGRVYKSKASRRTTSGPQTPI

MS014875 (gene) of Bitter gourd (TR) v1 genome