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MS014885 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014885
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold977:210722..210967
RNA-Seq ExpressionMS014885
SyntenyMS014885
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059514.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]1.8e-1855.56Show/hide
Query:  NKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
        NKAPGP+GF  EFLIK+W + KD F  L ++FH NG +N  ++ENFICL+ KK +A  + DF PISL++  YKV+AKVL++
Subjt:  NKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
RVW16109.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.3e-1654.32Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLT
        +NKAPGPDGFT     + W  +K+D VR+F EFH +G IN     +FI L+PKK  + RI DFRPISL +S+YK++AKVL+
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLT
RVW39477.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.3e-1654.88Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
        ++KAPGPDGFT       W  +K+D VR+F EFH +G IN     +FI LLPKK  + RI DFRPISL +S+YK++AKVL E
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
RVW98505.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.3e-1654.88Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
        ++KAPGPDGFT       W  +K+D VR+F EFH +G IN     +FI LLPKK  + RI DFRPISL +S+YK++AKVL E
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
XP_038905468.1 probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Benincasa hispida]4.7e-2258.54Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
        +NKAPGPDGFT EF++KFW  LKD+   +F+EF+ NG +N C+KENF+CL+ KK   + + DFRPIS S+ IYK++AKVL E
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
TrEMBL top hitse value%identityAlignment
A0A438BYN0 Transposon TX1 uncharacterized 149 kDa protein1.1e-1654.32Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLT
        +NKAPGPDGFT     + W  +K+D VR+F EFH +G IN     +FI L+PKK  + RI DFRPISL +S+YK++AKVL+
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLT
A0A438DVH3 Transposon TX1 uncharacterized 149 kDa protein1.1e-1654.88Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
        ++KAPGPDGFT       W  +K+D VR+F EFH +G IN     +FI LLPKK  + RI DFRPISL +S+YK++AKVL E
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
A0A438IPG2 Transposon TX1 uncharacterized 149 kDa protein1.1e-1654.88Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
        ++KAPGPDGFT       W  +K+D VR+F EFH +G IN     +FI LLPKK  + RI DFRPISL +S+YK++AKVL E
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
A0A5A7UWP4 Transposon TX1 uncharacterized8.9e-1955.56Show/hide
Query:  NKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
        NKAPGP+GF  EFLIK+W + KD F  L ++FH NG +N  ++ENFICL+ KK +A  + DF PISL++  YKV+AKVL++
Subjt:  NKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
A0A5D3E0C0 LINE-1 retrotransposable element ORF2 protein1.9e-1650Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
        +NKAP  DGFT +FL+  WP LK     L ++FH NG  N C++ENFICL+ KK   + + DFR ISL++  YKV+A VL +
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE
SwissProt top hitse value%identityAlignment
P08548 LINE-1 reverse transcriptase homolog7.5e-0739.02Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKK-VAALRIHDFRPISLSSSIYKVLAKVLT
        K K+PGPDGFT+EF   F   L    + LF      G +     E  I L+PK      R  ++RPISL +   K+L K+LT
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKK-VAALRIHDFRPISLSSSIYKVLAKVLT
P14381 Transposon TX1 uncharacterized 149 kDa protein9.5e-1040Show/hide
Query:  NKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLT
        NK+PG DG T EF   FW +L  DF R+  E    G +    +   + LLPKK     I ++RP+SL S+ YK++AK ++
Subjt:  NKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLT
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein8.8e-1136.84Show/hide
Query:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVL
        +NKAPGPD FT EF  + W  +KD  +    EF   GH+        I L+PK     ++  FRP+S  + +YK++
Subjt:  KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAATAAAGCACCAGGCCCTGATGGATTCACCACGGAATTCCTCATCAAATTCTGGCCATCTTTGAAAGATGATTTCGTTCGTTTGTTCAATGAATTCCACGGGAACGG
CCATATTAATGGGTGCCTCAAAGAGAACTTTATATGCCTTCTCCCCAAAAAAGTCGCAGCTTTAAGAATACATGACTTCAGACCAATAAGCCTCTCTTCTTCAATTTACA
AAGTGTTGGCCAAAGTCCTAACTGAA
mRNA sequenceShow/hide mRNA sequence
AAAAATAAAGCACCAGGCCCTGATGGATTCACCACGGAATTCCTCATCAAATTCTGGCCATCTTTGAAAGATGATTTCGTTCGTTTGTTCAATGAATTCCACGGGAACGG
CCATATTAATGGGTGCCTCAAAGAGAACTTTATATGCCTTCTCCCCAAAAAAGTCGCAGCTTTAAGAATACATGACTTCAGACCAATAAGCCTCTCTTCTTCAATTTACA
AAGTGTTGGCCAAAGTCCTAACTGAA
Protein sequenceShow/hide protein sequence
KNKAPGPDGFTTEFLIKFWPSLKDDFVRLFNEFHGNGHINGCLKENFICLLPKKVAALRIHDFRPISLSSSIYKVLAKVLTE