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MS014893 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014893
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionThylakoid soluble phosphoprotein TSP
Genome locationscaffold977:358369..358623
RNA-Seq ExpressionMS014893
SyntenyMS014893
Gene Ontology termsNA
InterPro domainsIPR021584 - Thylakoid soluble phosphoprotein TSP9
IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3970478.1 hypothetical protein CMV_005832 [Castanea mollissima]2.2e-3086.81Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG-----GRKNSVPVPQKKK-GGFGGLFSKN
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKNG     GRKNSV VPQKKK GGFGGLF+KN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG-----GRKNSVPVPQKKK-GGFGGLFSKN
RZB50975.1 hypothetical protein D0Y65_047713 [Glycine soja]4.8e-3082.61Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG-------RKNSVPVPQKKKGGFGGLFSKN
        MAS+ ++F+PA GRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG        KNSV VPQKKKGGFGGLF+KN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG-------RKNSVPVPQKKKGGFGGLFSKN
XP_007146732.1 hypothetical protein PHAVU_006G065100g [Phaseolus vulgaris]1.3e-3084.62Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG------GRKNSVPVPQKKKGGFGGLFSKN
        MAS+ ++FSPA GRVFAATAAKGAGGSKEEKG LDWILGGLQKEDQLLETDPILKKVEEKNG      GRKNSV VPQKKKGGFGGLF+KN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG------GRKNSVPVPQKKKGGFGGLFSKN
XP_022150888.1 uncharacterized protein LOC111018931 [Momordica charantia]1.7e-3598.82Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGGRKNSVPVPQKKKGGFGGLFSKN
        MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN GRKNSVPVPQKKKGGFGGLFSKN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGGRKNSVPVPQKKKGGFGGLFSKN
XP_030925866.1 uncharacterized protein LOC115952739 [Quercus lobata]2.2e-3086.81Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG-----GRKNSVPVPQKKK-GGFGGLFSKN
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKNG     GRKNSV VPQKKK GGFGGLF+KN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG-----GRKNSVPVPQKKK-GGFGGLFSKN
TrEMBL top hitse value%identityAlignment
A0A0R0EX21 Uncharacterized protein2.3e-3082.61Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG-------RKNSVPVPQKKKGGFGGLFSKN
        MAS+ ++F+PA GRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG        KNSV VPQKKKGGFGGLF+KN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG-------RKNSVPVPQKKKGGFGGLFSKN
A0A6J1D9Q5 uncharacterized protein LOC1110189318.3e-3698.82Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGGRKNSVPVPQKKKGGFGGLFSKN
        MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKN GRKNSVPVPQKKKGGFGGLFSKN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGGRKNSVPVPQKKKGGFGGLFSKN
A0A7N2KPW5 Uncharacterized protein1.1e-3086.81Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG-----GRKNSVPVPQKKK-GGFGGLFSKN
        MASL +AF+PAAGRVFAATAAKGAGGSKEEKGLLDWI+GGLQKEDQLLETDPILKKVEEKNG     GRKNSV VPQKKK GGFGGLF+KN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG-----GRKNSVPVPQKKK-GGFGGLFSKN
I1N020 Uncharacterized protein2.3e-3082.61Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG-------RKNSVPVPQKKKGGFGGLFSKN
        MAS+ ++F+PA GRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG        KNSV VPQKKKGGFGGLF+KN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGG-------RKNSVPVPQKKKGGFGGLFSKN
V7BQ66 Uncharacterized protein6.2e-3184.62Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG------GRKNSVPVPQKKKGGFGGLFSKN
        MAS+ ++FSPA GRVFAATAAKGAGGSKEEKG LDWILGGLQKEDQLLETDPILKKVEEKNG      GRKNSV VPQKKKGGFGGLF+KN
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG------GRKNSVPVPQKKKGGFGGLFSKN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47070.1 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3.6e-1548.42Show/hide
Query:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG----------GRKNS--VPVPQKKKGGFGGLFS
        ++SL ++F+PA  RV+A +   G+GG KEEK  +D++LG + K+DQ  ET+P+LKKV+EK G          G KNS   PVP+K +GGFGGL S
Subjt:  MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNG----------GRKNS--VPVPQKKKGGFGGLFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTCGCAGTAGCATTCTCTCCGGCCGCCGGAAGAGTTTTCGCGGCGACGGCTGCCAAGGGCGCCGGCGGAAGCAAGGAGGAGAAAGGACTTCTCGATTGGAT
TTTAGGAGGACTACAGAAAGAGGATCAGCTTCTCGAGACCGATCCGATCCTGAAGAAAGTGGAGGAGAAGAACGGCGGCCGGAAAAACTCCGTGCCGGTGCCGCAGAAGA
AGAAAGGAGGATTCGGAGGACTGTTTTCCAAGAAT
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTCGCAGTAGCATTCTCTCCGGCCGCCGGAAGAGTTTTCGCGGCGACGGCTGCCAAGGGCGCCGGCGGAAGCAAGGAGGAGAAAGGACTTCTCGATTGGAT
TTTAGGAGGACTACAGAAAGAGGATCAGCTTCTCGAGACCGATCCGATCCTGAAGAAAGTGGAGGAGAAGAACGGCGGCCGGAAAAACTCCGTGCCGGTGCCGCAGAAGA
AGAAAGGAGGATTCGGAGGACTGTTTTCCAAGAAT
Protein sequenceShow/hide protein sequence
MASLAVAFSPAAGRVFAATAAKGAGGSKEEKGLLDWILGGLQKEDQLLETDPILKKVEEKNGGRKNSVPVPQKKKGGFGGLFSKN