| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008446018.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] | 2.0e-199 | 95.91 | Show/hide |
Query: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPSEG NALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Subjt: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
LHWT DG QIV+ASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Subjt: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Query: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+WDT
Subjt: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| XP_022151978.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Momordica charantia] | 5.3e-208 | 99.71 | Show/hide |
Query: MQVVPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
MQVVPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLES IMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Subjt: MQVVPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Query: VLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTG
VLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTG
Subjt: VLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTG
Query: GIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYV
GIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYV
Subjt: GIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYV
Query: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| XP_022945717.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] | 3.3e-202 | 97.37 | Show/hide |
Query: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS G NALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
LHWTTDG QIV+ASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Subjt: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Query: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Subjt: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| XP_022966914.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima] | 1.3e-201 | 97.08 | Show/hide |
Query: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS G NALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLL GHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
LHWTTDG QIV+ASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Subjt: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Query: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Subjt: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| XP_023542336.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita pepo subsp. pepo] | 9.6e-202 | 97.08 | Show/hide |
Query: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS G NALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
LHWTTDG QIV+ASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Subjt: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Query: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
NDVKVWDLRKGEVM+TLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Subjt: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BDK5 U5 small nuclear ribonucleoprotein 40 kDa protein | 9.7e-200 | 95.91 | Show/hide |
Query: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPSEG NALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Subjt: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
LHWT DG QIV+ASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Subjt: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Query: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+WDT
Subjt: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| A0A5A7SYI1 U5 small nuclear ribonucleoprotein 40 kDa protein | 9.7e-200 | 95.91 | Show/hide |
Query: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPSEG NALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Subjt: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
LHWT DG QIV+ASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Subjt: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Query: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+WDT
Subjt: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| A0A6J1DDM1 U5 small nuclear ribonucleoprotein 40 kDa protein | 2.5e-208 | 99.71 | Show/hide |
Query: MQVVPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
MQVVPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLES IMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Subjt: MQVVPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Query: VLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTG
VLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTG
Subjt: VLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTG
Query: GIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYV
GIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYV
Subjt: GIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYV
Query: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| A0A6J1G1Q0 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.6e-202 | 97.37 | Show/hide |
Query: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS G NALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
LHWTTDG QIV+ASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Subjt: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Query: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Subjt: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| A0A6J1HV60 U5 small nuclear ribonucleoprotein 40 kDa protein | 6.1e-202 | 97.08 | Show/hide |
Query: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
VPS G NALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLL GHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAVLD
Subjt: VPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLD
Query: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
LHWTTDG QIV+ASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Subjt: LHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGID
Query: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Subjt: NDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDT
Query: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: TSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| SwissProt top hits | e value | %identity | Alignment |
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| Q2HJH6 U5 small nuclear ribonucleoprotein 40 kDa protein | 3.5e-122 | 60.52 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKM
G R SSL++PIMLL+GH+ +Y KF+P G +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDG + +AS DKT+ WD ETG++VK++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSS
SYLL+N MD + +WD+RP+AP+ RCV+I +G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRRILYKLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q55AR8 U5 small nuclear ribonucleoprotein 40 kDa protein | 8.1e-111 | 57.1 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKM
G +RTS LE PIM L GH+ IY+ KFN G +ASG DKEIFLWNV+G+C N+ VL+GHK +L+LHW+TD +I TA DK++ WD G+ +K++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VMMTLQGHQDMITGMQLSPD
EHS VNSCCP RRGPPL+ SGSDD +A+++D R +G+ F KY +T+V FSDASD++ TGGIDN ++VWD+R E + TL HQD IT +S D
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VMMTLQGHQDMITGMQLSPD
Query: GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCS
G+YLL+N MD IWD+RPYAP NR +K G Q+NFEKNL+K SWS DG ++ GSSDR VY+WDT ++++ Y LPGH+G+VNE FHP+EPI+ SCS
Subjt: GSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCS
Query: SDKQIYLGEI
SDK IYLGEI
Subjt: SDKQIYLGEI
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| Q5RF51 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.5e-120 | 60.19 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKM
G R SSL++PIMLL+GH+ +Y KF+P G +AS D+ I LWNV+GDC N+ L+G+ AV++LH+ TDG + +AS DKT+ WD ETG++VK++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSS
SYLL+N MD + +WD+RP+AP+ RCVKI +G+ HNFEKNLL+CSWSPDGSK+ AGS+DR V VWDTTSRRILYKLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein | 2.7e-122 | 58.46 | Show/hide |
Query: PYSAPQGPGPN-----GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDK
P + PQ P G R SSL++PIMLL+GH+ +Y KF+P G +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDG + +AS DK
Subjt: PYSAPQGPGPN-----GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDK
Query: TLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL
T+ WD ETG++VK++ H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T+
Subjt: TLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL
Query: QGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVN
+GH D +TG+ LS +GSYLL+N MD + +WD+RP+AP+ RCVKI +G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRR+LYKLPGH GS+N
Subjt: QGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVN
Query: ECVFHPSEPIVGSCSSDKQIYLGEI
E FHP EPI+ S SSDK++Y+GEI
Subjt: ECVFHPSEPIVGSCSSDKQIYLGEI
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| Q96DI7 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.6e-122 | 60.84 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKM
G R SSL++PIMLL+GH+ +Y KF+P G +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDG + +AS DKT+ WD ETG++VK++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSS
SYLL+N MD + +WD+RP+AP+ RCVKI +G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRRILYKLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G43770.1 Transducin/WD40 repeat-like superfamily protein | 2.9e-188 | 85.8 | Show/hide |
Query: MQVVPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
M+++ E AL+ GPRPMEWSTVP+SA QGPGPNGK RTSSLE+PIMLL+GH SA+YT+KFNPAG +IASGSHD+EIFLW VHGDCKNFMVL+GHKNA
Subjt: MQVVPSEGGNALATVGPRPMEWSTVPYSAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNA
Query: VLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTG
+LDLHWT+DG QIV+ASPDKT+RAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLI+SGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA+DKIFTG
Subjt: VLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTG
Query: GIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYV
G+DNDVKVWDLRKGE MTL+GHQD ITGM LSPDGSYLLTNGMD KLC+WDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDG+KVTAGSSDRMV++
Subjt: GIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYV
Query: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
WDTTSRR +YKLPGHTGSVNECVFHP+EPI+GSCSSDK IYLGEI
Subjt: WDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| AT3G49660.1 Transducin/WD40 repeat-like superfamily protein | 8.5e-39 | 29.73 | Show/hide |
Query: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSC
LT H A+ ++KF+ G ++AS S DK I + ++ + GH+N + D+ +++D IV+AS DKTL+ WDVETG +K + H+++ C
Subjt: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSC
Query: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
+IVSGS D T ++WD+ ++ P +TAV F+ I + D ++WD G + TL ++ ++ SP+G ++L +
Subjt: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQI
D L +W++ + +K GH N + + +G ++ +GS D V++W+ S+++L KL GHT +V HP+E ++ S S DK +
Subjt: DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQI
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| AT4G02730.1 Transducin/WD40 repeat-like superfamily protein | 3.1e-33 | 30.13 | Show/hide |
Query: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVL---RGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQ-VKKMAEHSSFVNSC
L GH +AI +KF+ G+++AS S DK + LW+ N+ ++ GH + + DL W++D +AS D TLR WD + + +K + H++FV C
Subjt: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVL---RGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQ-VKKMAEHSSFVNSC
Query: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
LIVSGS D T ++W+++ ++ I++V F+ I + D K+WD ++G + TL ++ + SP+G ++L +
Subjt: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWS----PDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSS--DK
D L + YA + +K+ GH N + C S +G + +GS D VY+WD +R IL +L GHT +V HP + + S + DK
Subjt: DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWS----PDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSS--DK
Query: QI
I
Subjt: QI
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| AT5G52820.1 WD-40 repeat family protein / notchless protein, putative | 2.0e-27 | 28.24 | Show/hide |
Query: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGK-QVKKMAEHSSFVN--SCC
+ GH A+ + F+P G +ASGS D + LW+++ + F +GHKN VL + W+ DG +V+ S + W+ + G+ + + H ++ S
Subjt: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGK-QVKKMAEHSSFVN--SCC
Query: PTRRGPPL--IVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
P P V+ S DG A++WD+ ++ I +T V + I+TG D +K+W+ +G+++ L+GH I + LS + Y+L G
Subjt: PTRRGPPL--IVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDM--RPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWD-TTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIY
+D R Y P K LE ++N K SP+ ++ +GS D +++W+ + S++ +L GH VN F P + S S DK +
Subjt: DCKLCIWDM--RPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWD-TTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIY
Query: L
L
Subjt: L
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| AT5G64730.1 Transducin/WD40 repeat-like superfamily protein | 2.6e-27 | 26.35 | Show/hide |
Query: LLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPT
+L GH+ A+ +FN G+ + D+ I LWN H + H V D+H T+D + + D+ + WDV TG+ ++K H VN+
Subjt: LLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGFQIVTASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPT
Query: RRGPPLIVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
++VS D + ++WD R I TF D T +S +I G +D V+ +D+R G M G + + +S DG+ +L +
Subjt: RRGPPLIVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQI
D L + D +++ +GH K C + + V GS D +V+ WD ++L K H V +HP E + + S D I
Subjt: DCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQI
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