; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014938 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014938
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsquamosa promoter-binding-like protein 12 isoform X1
Genome locationscaffold2:108994..109893
RNA-Seq ExpressionMS014938
SyntenyMS014938
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151883.1 squamosa promoter-binding-like protein 12 isoform X1 [Momordica charantia]3.5e-13499.59Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
        MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK

Query:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV
        NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY KHRVCESHSKSPKV
Subjt:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV

Query:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
Subjt:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

XP_022151887.1 squamosa promoter-binding-like protein 12 isoform X2 [Momordica charantia]3.5e-13499.59Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
        MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK

Query:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV
        NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY KHRVCESHSKSPKV
Subjt:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV

Query:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
Subjt:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

XP_022151888.1 squamosa promoter-binding-like protein 12 isoform X3 [Momordica charantia]3.5e-13499.59Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
        MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK

Query:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV
        NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY KHRVCESHSKSPKV
Subjt:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV

Query:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
Subjt:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

XP_023546611.1 squamosa promoter-binding-like protein 12 isoform X1 [Cucurbita pepo subsp. pepo]6.1e-10278.05Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFG---SSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI
        MEWNAR PLQWDW+NLTVLNPR +E GD+ H T FQTK  INFG   S+GDDR TG P F+ GQ SP+ SKSVS NS S E+SRTTKFTLEGFE TLED 
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFG---SSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI

Query:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKS
         +K EFVE EV +TY  PETSTCSCEPMLSLKLGKQAYFE++SA NLTKPS  M+ SRATRKRCQNT S HCQVEGCNID+S++KDYY KHRVCESHSKS
Subjt:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKS

Query:  PKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        PKVIIGG ERRFCQQCSRFH  SEFD KKRSCRRRLSNHNARRRKP
Subjt:  PKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

XP_023546627.1 squamosa promoter-binding-like protein 12 isoform X2 [Cucurbita pepo subsp. pepo]6.1e-10278.05Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFG---SSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI
        MEWNAR PLQWDW+NLTVLNPR +E GD+ H T FQTK  INFG   S+GDDR TG P F+ GQ SP+ SKSVS NS S E+SRTTKFTLEGFE TLED 
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFG---SSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI

Query:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKS
         +K EFVE EV +TY  PETSTCSCEPMLSLKLGKQAYFE++SA NLTKPS  M+ SRATRKRCQNT S HCQVEGCNID+S++KDYY KHRVCESHSKS
Subjt:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKS

Query:  PKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        PKVIIGG ERRFCQQCSRFH  SEFD KKRSCRRRLSNHNARRRKP
Subjt:  PKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

TrEMBL top hitse value%identityAlignment
A0A6J1DDE7 squamosa promoter-binding-like protein 12 isoform X31.7e-13499.59Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
        MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK

Query:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV
        NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY KHRVCESHSKSPKV
Subjt:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV

Query:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
Subjt:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

A0A6J1DED6 squamosa promoter-binding-like protein 12 isoform X11.7e-13499.59Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
        MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK

Query:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV
        NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY KHRVCESHSKSPKV
Subjt:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV

Query:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
Subjt:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

A0A6J1DEP3 squamosa promoter-binding-like protein 12 isoform X21.7e-13499.59Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
        MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDK

Query:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV
        NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY KHRVCESHSKSPKV
Subjt:  NEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKV

Query:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
Subjt:  IIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

A0A6J1GYM7 squamosa promoter-binding-like protein 12 isoform X25.6e-10178.05Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFG---SSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI
        MEWNAR PLQWDW+NLTVLNPR +E GD+ H T FQTK  INFG   S+GDDR TG P F+ GQ SP+ SKSVS NS S E+SRTTKFTLEGFE TLED 
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFG---SSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI

Query:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKS
         +K EFVE EV +TY  PETSTCSCEPMLSLKLGKQAYFE++SA NLTKPS  M+ SRATRKR QNT S HCQVEGCNID+S+VKDYY KHRVCESHSKS
Subjt:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKS

Query:  PKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        PKVIIGG ERRFCQQCSRFH  SEFD KKRSCRRRLSNHNARRRKP
Subjt:  PKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

A0A6J1GZM2 squamosa promoter-binding-like protein 12 isoform X15.6e-10178.05Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFG---SSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI
        MEWNAR PLQWDW+NLTVLNPR +E GD+ H T FQTK  INFG   S+GDDR TG P F+ GQ SP+ SKSVS NS S E+SRTTKFTLEGFE TLED 
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFG---SSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI

Query:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKS
         +K EFVE EV +TY  PETSTCSCEPMLSLKLGKQAYFE++SA NLTKPS  M+ SRATRKR QNT S HCQVEGCNID+S+VKDYY KHRVCESHSKS
Subjt:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKS

Query:  PKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        PKVIIGG ERRFCQQCSRFH  SEFD KKRSCRRRLSNHNARRRKP
Subjt:  PKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

SwissProt top hitse value%identityAlignment
A2X0Q6 Squamosa promoter-binding-like protein 34.6e-4444.09Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGD---LFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI
        M+WN +S + WDWEN+  +     E      L  S        I   S      T   S E G  S +SS S SI+S S +   T +      E   +++
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGD---LFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI

Query:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMA--------SRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHR
              V+D    T   P  +    EP++ LKLGK+ YFED   G   K S S ++        ++  +   QNT +PHCQVEGCN+DLSS K Y+ KHR
Subjt:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMA--------SRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHR

Query:  VCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        VCE HSK+ KVI+ GLERRFCQQCSRFHG +EFD+KKRSCRRRL +HNARRRKP
Subjt:  VCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

A2YGR5 Squamosa promoter-binding-like protein 128.7e-4341.57Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQV--INFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIG
        M WN +SP+ WDWEN     P   E          +   V   N GS+     T   S E    S +SS S S +S S +   + +F     +   +++ 
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQV--INFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIG

Query:  DKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----------SSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKH
           E     V ++   P  +    EP++ LKLGK+ YFE+          S+A  +T PS  +   + ++   Q+T S +CQVEGC +DLSS ++Y+ KH
Subjt:  DKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----------SSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKH

Query:  RVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        +VCE+HSK+PKVI+ GLERRFCQQCSRFHG +EFD+KK+SCRRRLS+HNARRRKP
Subjt:  RVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

A3A2Z8 Squamosa promoter-binding-like protein 34.6e-4444.09Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGD---LFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI
        M+WN +S + WDWEN+  +     E      L  S        I   S      T   S E G  S +SS S SI+S S +   T +      E   +++
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGD---LFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDI

Query:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMA--------SRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHR
              V+D    T   P  +    EP++ LKLGK+ YFED   G   K S S ++        ++  +   QNT +PHCQVEGCN+DLSS K Y+ KHR
Subjt:  GDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMA--------SRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHR

Query:  VCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        VCE HSK+ KVI+ GLERRFCQQCSRFHG +EFD+KKRSCRRRL +HNARRRKP
Subjt:  VCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

Q5Z818 Squamosa promoter-binding-like protein 128.7e-4341.57Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQV--INFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIG
        M WN +SP+ WDWEN     P   E          +   V   N GS+     T   S E    S +SS S S +S S +   + +F     +   +++ 
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQV--INFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIG

Query:  DKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----------SSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKH
           E     V ++   P  +    EP++ LKLGK+ YFE+          S+A  +T PS  +   + ++   Q+T S +CQVEGC +DLSS ++Y+ KH
Subjt:  DKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----------SSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKH

Query:  RVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        +VCE+HSK+PKVI+ GLERRFCQQCSRFHG +EFD+KK+SCRRRLS+HNARRRKP
Subjt:  RVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

Q9S840 Squamosa promoter-binding-like protein 25.4e-4546.36Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAE----------QGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGF
        ME NA+ P QW+ ENL       AE          + D F  T+  +      GSSG D               +SSKS SI+S S  E RT  FT E  
Subjt:  MEWNARSPLQWDWENLTVLNPRIAE----------QGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGF

Query:  EATLEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----SSAGNLTKP----SFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVK
        E+         EF +    +T    E S  S +P+L LKLGK+ YFED     +A  L  P    S S+   + ++   Q   +PHCQVEGCN+DLSS K
Subjt:  EATLEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----SSAGNLTKP----SFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVK

Query:  DYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        DY+ KHR+CE+HSK PKV++ G+ERRFCQQCSRFH  SEFDEKKRSCRRRLS+HNARRRKP
Subjt:  DYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

Arabidopsis top hitse value%identityAlignment
AT1G27370.1 squamosa promoter binding protein-like 102.2e-4141.86Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKS-------PESSKSVSINSLSIEESRTTKFTLEGFEAT
        M+ N  S   WDWENL + N    E      ST ++ ++     S   D   G     +G  +        +SS+S SINS S E+ R          A+
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKS-------PESSKSVSINSLSIEESRTTKFTLEGFEAT

Query:  LEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFE--------DSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY
            GD +  ++          E    S E  L LKLGK+ Y E        D SA ++   + S++A + T+   Q+   P CQ++GC +DLSS KDY+
Subjt:  LEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFE--------DSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY

Query:  LKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
         KHRVCE+HSK PKV++ GLERRFCQQCSRFH  SEFDEKKRSCR+RLS+HNARRRKP
Subjt:  LKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

AT1G27370.2 squamosa promoter binding protein-like 102.2e-4141.86Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKS-------PESSKSVSINSLSIEESRTTKFTLEGFEAT
        M+ N  S   WDWENL + N    E      ST ++ ++     S   D   G     +G  +        +SS+S SINS S E+ R          A+
Subjt:  MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKS-------PESSKSVSINSLSIEESRTTKFTLEGFEAT

Query:  LEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFE--------DSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY
            GD +  ++          E    S E  L LKLGK+ Y E        D SA ++   + S++A + T+   Q+   P CQ++GC +DLSS KDY+
Subjt:  LEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFE--------DSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYY

Query:  LKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
         KHRVCE+HSK PKV++ GLERRFCQQCSRFH  SEFDEKKRSCR+RLS+HNARRRKP
Subjt:  LKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

AT5G43270.1 squamosa promoter binding protein-like 23.9e-4646.36Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAE----------QGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGF
        ME NA+ P QW+ ENL       AE          + D F  T+  +      GSSG D               +SSKS SI+S S  E RT  FT E  
Subjt:  MEWNARSPLQWDWENLTVLNPRIAE----------QGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGF

Query:  EATLEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----SSAGNLTKP----SFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVK
        E+         EF +    +T    E S  S +P+L LKLGK+ YFED     +A  L  P    S S+   + ++   Q   +PHCQVEGCN+DLSS K
Subjt:  EATLEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----SSAGNLTKP----SFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVK

Query:  DYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        DY+ KHR+CE+HSK PKV++ G+ERRFCQQCSRFH  SEFDEKKRSCRRRLS+HNARRRKP
Subjt:  DYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

AT5G43270.2 squamosa promoter binding protein-like 23.9e-4646.36Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAE----------QGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGF
        ME NA+ P QW+ ENL       AE          + D F  T+  +      GSSG D               +SSKS SI+S S  E RT  FT E  
Subjt:  MEWNARSPLQWDWENLTVLNPRIAE----------QGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGF

Query:  EATLEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----SSAGNLTKP----SFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVK
        E+         EF +    +T    E S  S +P+L LKLGK+ YFED     +A  L  P    S S+   + ++   Q   +PHCQVEGCN+DLSS K
Subjt:  EATLEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----SSAGNLTKP----SFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVK

Query:  DYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        DY+ KHR+CE+HSK PKV++ G+ERRFCQQCSRFH  SEFDEKKRSCRRRLS+HNARRRKP
Subjt:  DYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP

AT5G43270.3 squamosa promoter binding protein-like 23.9e-4646.36Show/hide
Query:  MEWNARSPLQWDWENLTVLNPRIAE----------QGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGF
        ME NA+ P QW+ ENL       AE          + D F  T+  +      GSSG D               +SSKS SI+S S  E RT  FT E  
Subjt:  MEWNARSPLQWDWENLTVLNPRIAE----------QGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGF

Query:  EATLEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----SSAGNLTKP----SFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVK
        E+         EF +    +T    E S  S +P+L LKLGK+ YFED     +A  L  P    S S+   + ++   Q   +PHCQVEGCN+DLSS K
Subjt:  EATLEDIGDKNEFVEDEVANTYAKPETSTCSCEPMLSLKLGKQAYFED----SSAGNLTKP----SFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVK

Query:  DYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP
        DY+ KHR+CE+HSK PKV++ G+ERRFCQQCSRFH  SEFDEKKRSCRRRLS+HNARRRKP
Subjt:  DYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTSEFDEKKRSCRRRLSNHNARRRKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGAATGCAAGATCCCCTTTACAATGGGATTGGGAGAACCTAACTGTACTTAATCCCAGAATTGCTGAACAGGGTGATTTGTTTCATTCAACTAATTTTCAAAC
TAAACAAGTAATAAACTTTGGATCTTCCGGGGATGATAGGAGGACTGGTCGTCCTTCTTTTGAGACGGGGCAAAAATCTCCAGAAAGCTCAAAATCAGTTTCCATAAATT
CTTTGTCAATTGAGGAAAGTAGAACAACCAAATTTACACTTGAGGGGTTTGAGGCCACTTTAGAAGATATTGGCGATAAAAACGAATTTGTTGAGGACGAAGTGGCCAAC
ACATATGCAAAACCTGAGACTTCAACTTGCTCCTGCGAGCCAATGCTGAGTCTGAAGCTTGGTAAGCAGGCGTACTTTGAAGATTCTAGTGCTGGAAATCTTACAAAGCC
ATCTTTTTCCATGATGGCATCACGAGCTACTCGAAAGAGGTGCCAGAATACAACATCTCCTCACTGCCAAGTTGAAGGTTGTAACATAGATCTTTCAAGTGTTAAGGATT
ACTATCTCAAACATAGAGTTTGTGAAAGTCACTCCAAATCTCCTAAGGTCATCATTGGAGGCTTAGAGCGTCGGTTTTGTCAACAATGTAGTAGGTTTCATGGCACATCT
GAATTTGATGAGAAGAAACGAAGTTGTCGTAGGCGTCTTTCTAATCACAATGCTCGACGTCGTAAGCCA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGGAATGCAAGATCCCCTTTACAATGGGATTGGGAGAACCTAACTGTACTTAATCCCAGAATTGCTGAACAGGGTGATTTGTTTCATTCAACTAATTTTCAAAC
TAAACAAGTAATAAACTTTGGATCTTCCGGGGATGATAGGAGGACTGGTCGTCCTTCTTTTGAGACGGGGCAAAAATCTCCAGAAAGCTCAAAATCAGTTTCCATAAATT
CTTTGTCAATTGAGGAAAGTAGAACAACCAAATTTACACTTGAGGGGTTTGAGGCCACTTTAGAAGATATTGGCGATAAAAACGAATTTGTTGAGGACGAAGTGGCCAAC
ACATATGCAAAACCTGAGACTTCAACTTGCTCCTGCGAGCCAATGCTGAGTCTGAAGCTTGGTAAGCAGGCGTACTTTGAAGATTCTAGTGCTGGAAATCTTACAAAGCC
ATCTTTTTCCATGATGGCATCACGAGCTACTCGAAAGAGGTGCCAGAATACAACATCTCCTCACTGCCAAGTTGAAGGTTGTAACATAGATCTTTCAAGTGTTAAGGATT
ACTATCTCAAACATAGAGTTTGTGAAAGTCACTCCAAATCTCCTAAGGTCATCATTGGAGGCTTAGAGCGTCGGTTTTGTCAACAATGTAGTAGGTTTCATGGCACATCT
GAATTTGATGAGAAGAAACGAAGTTGTCGTAGGCGTCTTTCTAATCACAATGCTCGACGTCGTAAGCCA
Protein sequenceShow/hide protein sequence
MEWNARSPLQWDWENLTVLNPRIAEQGDLFHSTNFQTKQVINFGSSGDDRRTGRPSFETGQKSPESSKSVSINSLSIEESRTTKFTLEGFEATLEDIGDKNEFVEDEVAN
TYAKPETSTCSCEPMLSLKLGKQAYFEDSSAGNLTKPSFSMMASRATRKRCQNTTSPHCQVEGCNIDLSSVKDYYLKHRVCESHSKSPKVIIGGLERRFCQQCSRFHGTS
EFDEKKRSCRRRLSNHNARRRKP