; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014939 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014939
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRanBP2-type zinc finger protein
Genome locationscaffold2:113911..117378
RNA-Seq ExpressionMS014939
SyntenyMS014939
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034188.1 ranBP2-type zinc finger protein [Cucumis melo var. makuwa]6.9e-17484.07Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSS+YPGVPPYGSSIFNGSSI
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
        PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PP++DRYGMALPMGP  MGPRPGFFPD+M QKK ADTTRDNDWACPKC
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC

Query:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQWIPFNLVNKIIYEPPPL
        GNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQEENDQWIP+NL+NKI+ E    
Subjt:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQWIPFNLVNKIIYEPPPL

Query:  EKVNPVGKFSVVVVLLLSVPICFLILFSRSCINLSLCTVPVSSRTCLRVEKVQSYLPALLNMGV
           NP                                   VSSRTCLRVEKVQ YLPALLNMGV
Subjt:  EKVNPVGKFSVVVVLLLSVPICFLILFSRSCINLSLCTVPVSSRTCLRVEKVQSYLPALLNMGV

KAG7032363.1 RanBP2-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]3.8e-16475.12Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS---------KSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYG
        QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS         KSAAKPVQA QGYSYSAPYMGSG PSS+YPGVPPYG
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS---------KSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYG

Query:  SSIFNGSSIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNS----------AVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDM
        SSIFNGSSIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGP PYSSGSMMGNS          AVYGMPP++DRYGMALPMGP TMGPRPGFFPDDM
Subjt:  SSIFNGSSIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNS----------AVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDM

Query:  GQKKIADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEEN
         QKK AD TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDK++KQKTPEGSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQEEN
Subjt:  GQKKIADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEEN

Query:  DQ---------------------------WIPFNLVNKIIYEPPPLEKVNPVGKFSVVVVLLLSVPICFLILFSRSCINLSLCTVPVSSRTCLRVEKVQS
        DQ                           WIP NL+NKIIYE  PLEK  P                                   VSSRTCLRVEKVQS
Subjt:  DQ---------------------------WIPFNLVNKIIYEPPPLEKVNPVGKFSVVVVLLLSVPICFLILFSRSCINLSLCTVPVSSRTCLRVEKVQS

Query:  YLPALLNMGV
        YLPALLNMGV
Subjt:  YLPALLNMGV

XP_022151944.1 ranBP2-type zinc finger protein At1g67325 isoform X1 [Momordica charantia]6.5e-16499.65Show/hide
Query:  VDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIP
        VDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIP
Subjt:  VDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIP

Query:  PYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKCG
        PYDVPFSGGSAYHYNY SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKCG
Subjt:  PYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKCG

Query:  NINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ
        NINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ
Subjt:  NINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ

XP_022151945.1 ranBP2-type zinc finger protein At1g67325 isoform X2 [Momordica charantia]1.7e-16499.65Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
        PPYDVPFSGGSAYHYNY SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC

Query:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ
        GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ
Subjt:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ

XP_023518420.1 ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita pepo subsp. pepo]1.9e-16385.5Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQA QGYSYSAPYMGSG PSS+YPGVPPYGSSIFNGSSI
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
        PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGP PYSSGSMMGNSAVYGMPP++DRYGMALPMGP TMGPRPGFFPDDM QKK AD TRDNDWACPKC
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC

Query:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ-----------------
        GNINFSFRTVCNMRKCNTPKPGSQGSKNDK++KQKTPEGSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQEENDQ                 
Subjt:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ-----------------

Query:  ----------WIPFNLVNKIIYEPPPLEKVNPVGKFSV
                  WIP NL+NKIIYE  PLEK  P GKFSV
Subjt:  ----------WIPFNLVNKIIYEPPPLEKVNPVGKFSV

TrEMBL top hitse value%identityAlignment
A0A5A7SU69 RanBP2-type zinc finger protein3.3e-17484.07Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSS+YPGVPPYGSSIFNGSSI
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
        PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYG+PP++DRYGMALPMGP  MGPRPGFFPD+M QKK ADTTRDNDWACPKC
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC

Query:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQWIPFNLVNKIIYEPPPL
        GNINFSFRTVCNMRKCNTPKPGSQ SKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPSPAQEENDQWIP+NL+NKI+ E    
Subjt:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQWIPFNLVNKIIYEPPPL

Query:  EKVNPVGKFSVVVVLLLSVPICFLILFSRSCINLSLCTVPVSSRTCLRVEKVQSYLPALLNMGV
           NP                                   VSSRTCLRVEKVQ YLPALLNMGV
Subjt:  EKVNPVGKFSVVVVLLLSVPICFLILFSRSCINLSLCTVPVSSRTCLRVEKVQSYLPALLNMGV

A0A6J1DCL2 ranBP2-type zinc finger protein At1g67325 isoform X28.2e-16599.65Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
        PPYDVPFSGGSAYHYNY SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC

Query:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ
        GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ
Subjt:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ

A0A6J1DEJ3 ranBP2-type zinc finger protein At1g67325 isoform X13.1e-16499.65Show/hide
Query:  VDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIP
        VDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIP
Subjt:  VDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIP

Query:  PYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKCG
        PYDVPFSGGSAYHYNY SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKCG
Subjt:  PYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKCG

Query:  NINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ
        NINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ
Subjt:  NINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ

A0A6J1GZ81 ranBP2-type zinc finger protein At1g67325 isoform X14.5e-16385.21Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQA QGYSYSAPYMGSG PSS+YPGVPPYGSSIFNGSSI
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
        PPYDVPFSGGSAYHYNYGSR SAGSPYRPLHLSGP PYSSGSMMGNSAVYGMPP++DRYGMALPMGP TMGPRPGFFPDDM QKK AD TRDNDWACPKC
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC

Query:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ-----------------
        GNINFSFRTVCNMRKCNTPKPGSQGSKNDK++KQKTPEGSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQEENDQ                 
Subjt:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ-----------------

Query:  ----------WIPFNLVNKIIYEPPPLEKVNPVGKFSV
                  WIP NL+NKIIYE  PLEK  P GKFSV
Subjt:  ----------WIPFNLVNKIIYEPPPLEKVNPVGKFSV

A0A6J1KDP3 ranBP2-type zinc finger protein At1g67325 isoform X11.7e-16284.91Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQA QGYSYSAPYMGSG PSS+YPGVPPYGSSIFNGSSI
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC
        PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGP PYSSGSMMGNSAVYGMPP++DRYGMALPMGP T+GPRPGFFPDDM QKK AD TRDNDWACPKC
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKC

Query:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ-----------------
        GNINFSFRTVCNMRKCNTPKPGSQGSKNDK++KQKTPEGSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQEENDQ                 
Subjt:  GNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ-----------------

Query:  ----------WIPFNLVNKIIYEPPPLEKVNPVGKFSV
                  WI  NL+NKIIYE  PLEK  P GKFSV
Subjt:  ----------WIPFNLVNKIIYEPPPLEKVNPVGKFSV

SwissProt top hitse value%identityAlignment
Q8GZ43 RanBP2-type zinc finger protein At1g673253.5e-12072.92Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGP---ATMGPRPGFFPDDMGQKKIADTTRDNDWAC
        PPYDVPFSGGS YH+NY SR  AG+ YRPLH+SGP PY  GSMMG+  +YGMPP IDRYG+ + MGP   A M PRP F+PD+  QK+  D+TRDNDW C
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGP---ATMGPRPGFFPDDMGQKKIADTTRDNDWAC

Query:  PKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQEENDQ
        P CGN+NFSFRTVCNMRKCNTPKPGS QG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A EENDQ
Subjt:  PKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQEENDQ

Q9AST1 Transcription initiation factor TFIID subunit 154.1e-0463.33Show/hide
Query:  NDWACPKCGNINFSFRTVCNMRKCNTPKPG
        NDWACP CGN+N++ R  CN+  CNT KPG
Subjt:  NDWACPKCGNINFSFRTVCNMRKCNTPKPG

Arabidopsis top hitse value%identityAlignment
AT1G50300.1 TBP-associated factor 152.9e-0563.33Show/hide
Query:  NDWACPKCGNINFSFRTVCNMRKCNTPKPG
        NDWACP CGN+N++ R  CN+  CNT KPG
Subjt:  NDWACPKCGNINFSFRTVCNMRKCNTPKPG

AT1G67325.1 Ran BP2/NZF zinc finger-like superfamily protein1.0e-12273.17Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGP---ATMGPRPGFFPDDMGQKKIADTTRDNDWAC
        PPYDVPFSGGS YH+NY SR  AG+ YRPLH+SGP PY  GSMMG+  +YGMPP IDRYG+ + MGP   A M PRP F+PD+  QK+  D+TRDNDW C
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGP---ATMGPRPGFFPDDMGQKKIADTTRDNDWAC

Query:  PKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQEENDQ
        P CGN+NFSFRTVCNMRKCNTPKPGSQG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A EENDQ
Subjt:  PKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQEENDQ

AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein2.5e-12172.92Show/hide
Query:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI
        QVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+
Subjt:  QVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSI

Query:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGP---ATMGPRPGFFPDDMGQKKIADTTRDNDWAC
        PPYDVPFSGGS YH+NY SR  AG+ YRPLH+SGP PY  GSMMG+  +YGMPP IDRYG+ + MGP   A M PRP F+PD+  QK+  D+TRDNDW C
Subjt:  PPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGP---ATMGPRPGFFPDDMGQKKIADTTRDNDWAC

Query:  PKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQEENDQ
        P CGN+NFSFRTVCNMRKCNTPKPGS QG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A EENDQ
Subjt:  PKCGNINFSFRTVCNMRKCNTPKPGS-QGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSPAQEENDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGTACAGGTTGATAGCAGGAATTCGTCCGCAGCCAAACGTGCCAGAACTGATGGTAGCCGAAGGGAAGATGACTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTC
ATTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCCCGTCCTGCTGACCATAATTCTAAATCTGCTGCCAAGCCTGTTCAAGCTCCACAGGGTTACTCCTATTCTG
CCCCTTACATGGGATCTGGTGCACCATCTTCAATATATCCTGGTGTACCACCTTATGGTTCTTCCATATTCAATGGTTCATCTATACCTCCCTATGATGTGCCATTTTCC
GGGGGATCAGCATATCATTACAACTACGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCTTTGCATCTATCTGGTCCCGCACCTTATTCAAGTGGATCTATGATGGG
AAATAGTGCAGTATATGGTATGCCACCCATGATTGATCGCTATGGCATGGCTTTGCCCATGGGCCCTGCCACCATGGGTCCGAGGCCAGGTTTTTTTCCAGATGATATGG
GTCAGAAGAAGATTGCAGACACTACTCGTGACAATGATTGGGCATGCCCGAAATGTGGAAATATCAACTTCTCATTTAGAACTGTCTGTAACATGAGGAAGTGCAATACA
CCAAAGCCTGGGTCACAGGGTTCCAAAAATGACAAAAGTTCTAAACAAAAGACGCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAACTATCCATTCCGAAC
CAAGTGCAATAGACAAAATTGTGGAGCCGACAAACCAGCGGATTCCGAGAAATCTCCATCACCTGCACAGGAGGAAAATGATCAGTGGATTCCATTCAATTTGGTAAACA
AGATAATATATGAACCACCTCCACTTGAAAAGGTGAACCCTGTTGGTAAATTTTCGGTGGTAGTGGTACTTTTGTTGAGTGTACCCATTTGTTTTCTAATTTTATTTTCC
CGTTCATGCATTAATTTGTCATTGTGTACTGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTC
mRNA sequenceShow/hide mRNA sequence
CTTGTACAGGTTGATAGCAGGAATTCGTCCGCAGCCAAACGTGCCAGAACTGATGGTAGCCGAAGGGAAGATGACTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTC
ATTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCCCGTCCTGCTGACCATAATTCTAAATCTGCTGCCAAGCCTGTTCAAGCTCCACAGGGTTACTCCTATTCTG
CCCCTTACATGGGATCTGGTGCACCATCTTCAATATATCCTGGTGTACCACCTTATGGTTCTTCCATATTCAATGGTTCATCTATACCTCCCTATGATGTGCCATTTTCC
GGGGGATCAGCATATCATTACAACTACGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCTTTGCATCTATCTGGTCCCGCACCTTATTCAAGTGGATCTATGATGGG
AAATAGTGCAGTATATGGTATGCCACCCATGATTGATCGCTATGGCATGGCTTTGCCCATGGGCCCTGCCACCATGGGTCCGAGGCCAGGTTTTTTTCCAGATGATATGG
GTCAGAAGAAGATTGCAGACACTACTCGTGACAATGATTGGGCATGCCCGAAATGTGGAAATATCAACTTCTCATTTAGAACTGTCTGTAACATGAGGAAGTGCAATACA
CCAAAGCCTGGGTCACAGGGTTCCAAAAATGACAAAAGTTCTAAACAAAAGACGCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAACTATCCATTCCGAAC
CAAGTGCAATAGACAAAATTGTGGAGCCGACAAACCAGCGGATTCCGAGAAATCTCCATCACCTGCACAGGAGGAAAATGATCAGTGGATTCCATTCAATTTGGTAAACA
AGATAATATATGAACCACCTCCACTTGAAAAGGTGAACCCTGTTGGTAAATTTTCGGTGGTAGTGGTACTTTTGTTGAGTGTACCCATTTGTTTTCTAATTTTATTTTCC
CGTTCATGCATTAATTTGTCATTGTGTACTGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTC
Protein sequenceShow/hide protein sequence
LVQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSIYPGVPPYGSSIFNGSSIPPYDVPFS
GGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPMIDRYGMALPMGPATMGPRPGFFPDDMGQKKIADTTRDNDWACPKCGNINFSFRTVCNMRKCNT
PKPGSQGSKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQWIPFNLVNKIIYEPPPLEKVNPVGKFSVVVVLLLSVPICFLILFS
RSCINLSLCTVPVSSRTCLRVEKVQSYLPALLNMGV