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MS014945 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014945
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold2:140544..140797
RNA-Seq ExpressionMS014945
SyntenyMS014945
Gene Ontology termsGO:0009765 - photosynthesis, light harvesting (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RXH79902.1 hypothetical protein DVH24_041049 [Malus domestica]4.1e-0550Show/hide
Query:  RPVPVPPQLLQNMRPEPEG--PAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEAGG
        RP    P      R    G  PA D+ +GPA  EAGD   +VA G A EG GHGLLVH RFD++ A +DAE GG
Subjt:  RPVPVPPQLLQNMRPEPEG--PAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEAGG
TYK15728.1 chlorophyll a-b binding protein 7 [Cucumis melo var. makuwa]2.7e-0975Show/hide
Query:  GPAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEA
        G AADV+VGPAG E GD A AVAG AAGEG GHGL+VH  FD++GAGEDAEA
Subjt:  GPAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEA
TrEMBL top hitse value%identityAlignment
A0A498ICN2 Chlorophyll a-b binding protein, chloroplastic2.0e-0550Show/hide
Query:  RPVPVPPQLLQNMRPEPEG--PAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEAGG
        RP    P      R    G  PA D+ +GPA  EAGD   +VA G A EG GHGLLVH RFD++ A +DAE GG
Subjt:  RPVPVPPQLLQNMRPEPEG--PAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEAGG
A0A5D3CWU8 Chlorophyll a-b binding protein, chloroplastic1.3e-0975Show/hide
Query:  GPAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEA
        G AADV+VGPAG E GD A AVAG AAGEG GHGL+VH  FD++GAGEDAEA
Subjt:  GPAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGTCCGGCGAACGGAGAGTTGGGCCGGGATGGGGCGACCCGTACCCGTTCCGCCGCAGCTGCTACAGAACATGCGACCGGAGCCGGAGGGTCCGGCAGCCGACGTCGC
CGTCGGACCAGCGGGAACAGAGGCAGGCGACACGGCCGGTGCCGTTGCAGGAGGGGCAGCGGGGGAAGGGCCCGGCCATGGGCTTCTGGTCCATCACCGATTTGACCAAA
ACGGCGCCGGCGAGGACGCTGAGGCCGGTGGC
mRNA sequenceShow/hide mRNA sequence
TTGGTCCGGCGAACGGAGAGTTGGGCCGGGATGGGGCGACCCGTACCCGTTCCGCCGCAGCTGCTACAGAACATGCGACCGGAGCCGGAGGGTCCGGCAGCCGACGTCGC
CGTCGGACCAGCGGGAACAGAGGCAGGCGACACGGCCGGTGCCGTTGCAGGAGGGGCAGCGGGGGAAGGGCCCGGCCATGGGCTTCTGGTCCATCACCGATTTGACCAAA
ACGGCGCCGGCGAGGACGCTGAGGCCGGTGGC
Protein sequenceShow/hide protein sequence
LVRRTESWAGMGRPVPVPPQLLQNMRPEPEGPAADVAVGPAGTEAGDTAGAVAGGAAGEGPGHGLLVHHRFDQNGAGEDAEAGG